Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4296g00050 ATGAGCTCGTTCTTTCTTCTTCTTCTTCTCTTTCAGTTATGCATACTCAGAATCGAAGCCAAGTGCAGGCCTAAGTATGGCTGCGAGCTAGCTTTAGCTTCCTACTACGTTGAAGGAGAAAACGCCAACCTCACTCGAATCAGCGGCCTTTTCGATCAGAAAATTCCAGACATTCTCAAATACAATCCCAATCTCCGAAACCCTAACACTACCCTCCCAGCCCAGATTCGACTCCGCCTGCCCTTCACGTGCCGCTGCTTGAACGAAGAGTTCTTAGGTCACACCTTCTCTTACACCATGCAACGCGGCGATACCTACACGTCCATTGCTCATAAGACTTTCGCCGGCCTCACCGACGACCATTGGGTGAGCAGAGTCAACCTTCTCCAACCTAACCAGATACCTACCGGCACCCGCGTCAATGTTACTGTGAATTGCTCCTGCGGCGATGCGCACGTGTCCAGGGATTATGGGCTGTTCTTGACGTATCCAATTCGGCCAGGCGAGGGATTGTCGAAGGTTGCGGCGGAGAATGGTGTTCCGGCCGAGTTGCTTCAGAGGTACAATCCTGGGTCCGATTTCAGCGCCGGCCTGGTGTTTGTGCCGGCTAGAGATGAAAATGGAAACTATCCACCATTGAAGTTGAGATCAGGTGATGATGAGGATACTGCACTGCTATATTCAAGAAATTCTGGGGGAACTATTGCTGCTATGGTTGGTGGAAGCATTTCTGGGACCTTGCTCTTGGGACTACTATATTTCGGGCTATGTAGAAGAAAGAGAGTGGAAGACGCATCCTTTTTCACAAATCCACTAGCATTTGAAGATAAGCATAATCAAATTGGACATGGTTCTGGAAACTGCTCGGAGAAGCAACCAGAATTGGTTGGTGATGCTTCTCCTAGATTGAAAGGTATTACAGTGGACAAATCAGTGGAGTTCTCATATGAGGAGCTTGCTGAAGCTACTAATGGTTTTAGTATGGCCAATAAGATTGGACAAGGAGGCTTTGGATCTGTTTACTTTGCAGAACTTCGAAATGAGAAAGTGGCGATTAAGAAGATGGATATGCAAGCAACAAAAGAATTCCTTACTGAACTGAAGTTTCTTACCCATGTCCATCACCTAAACTTGGTACGTTTGATTGGATATTGCGTTAAGAACTCCTTATTTTTGGTCTATGAGTACATCGAGAATGGCAATCTAAGCCAACATTTACGTGGCTCAGAGAGGGAGCCATTATCATGGCCAAGTAGAGTGCAAATAGCCTTGGATGCAGCAAGAGGACTTGCATACATCCACGAGCAAACAGTTCCTGTCTACATCCATGGAGACATTAAATCTCCAAACATATTAATTGACAAAAACTTTCGAGGAAAGGTTGCAGATTTTGGTCAAACAAATTTGACAGAATATGGAAGTTCTTCAATGCCATCACATCTAGTGGGCACATTTGGCTACCTACCTCCAGAATATGCAAAATATGGCGACTTTTCCCTCAAAACAGATGTCTATGCATTCGGAGTTGTTCTCTACGAACTCATATCCGCAAAGGAAGCTATTGTGAAGACCAAAGAGCCTGCGAATGAATCAAAGGGACTGGTTGCCTTGTTTCAAGAGGTTCTGAATCAGCAAAATCCAGAAAAAGACCTTCGTGAACTTGTTGACCCCAGGCTCGGTGACAACTACCCTTTTGACTCGGTATACAAGATGTGTCAGCTAGCGAAAGCTTGCACACAGGAAAATCCCCAAGTAAGGCCAAGCATGAGATCAATTGTAGTTGCACTGGTGGTTCTGTCGTCTCCAAGTGAGGACTTGTGCAGAGTAAGCTACTCATATTTTGACAGTTCTTGA 1854 0.4547 MSSFFLLLLLFQLCILRIEAKCRPKYGCELALASYYVEGENANLTRISGLFDQKIPDILKYNPNLRNPNTTLPAQIRLRLPFTCRCLNEEFLGHTFSYTMQRGDTYTSIAHKTFAGLTDDHWVSRVNLLQPNQIPTGTRVNVTVNCSCGDAHVSRDYGLFLTYPIRPGEGLSKVAAENGVPAELLQRYNPGSDFSAGLVFVPARDENGNYPPLKLRSGDDEDTALLYSRNSGGTIAAMVGGSISGTLLLGLLYFGLCRRKRVEDASFFTNPLAFEDKHNQIGHGSGNCSEKQPELVGDASPRLKGITVDKSVEFSYEELAEATNGFSMANKIGQGGFGSVYFAELRNEKVAIKKMDMQATKEFLTELKFLTHVHHLNLVRLIGYCVKNSLFLVYEYIENGNLSQHLRGSEREPLSWPSRVQIALDAARGLAYIHEQTVPVYIHGDIKSPNILIDKNFRGKVADFGQTNLTEYGSSSMPSHLVGTFGYLPPEYAKYGDFSLKTDVYAFGVVLYELISAKEAIVKTKEPANESKGLVALFQEVLNQQNPEKDLRELVDPRLGDNYPFDSVYKMCQLAKACTQENPQVRPSMRSIVVALVVLSSPSEDLCRVSYSYFDSS 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4296g00050 617 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Pral4296g00050 617 FunFam PTI1-like tyrosine-protein kinase 3 397 608 - -
Pral4296g00050 617 Gene3D Transferase(Phosphotransferase) domain 1 397 601 - -
Pral4296g00050 617 Pfam Protein tyrosine and serine/threonine kinase 328 595 IPR001245 GO:0004672|GO:0006468
Pral4296g00050 617 FunFam LysM receptor kinase 2 305 396 - -
Pral4296g00050 617 Gene3D Phosphorylase Kinase; domain 1 300 396 - -
Pral4296g00050 617 ProSiteProfiles Protein kinase domain profile. 326 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4296g00050 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Pral4296g00050 617 SUPERFAMILY Protein kinase-like (PK-like) 307 597 IPR011009 -
Pral4296g00050 617 ProSiteProfiles LysM domain profile. 96 142 IPR018392 -
Pral4296g00050 617 SMART serkin_6 326 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4296g00050 617 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 605 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4296g00050 Pral-Chr4296 288981 296347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4296g00050 7 603 Receptor kinase-like Gene Family AT3G21630 52.381 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral4296g00050 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4296g00050 - K13429 qsa:O6P43_031279 746.888