Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4296g00046 ATGGAGGTGTTCTGCTCAAATGTTTTTGAGGTTTCAAGGAGGAGAAAGGTTCAAGAGAGTCACAAGTATACTCCAACCTCTGCAGAGGAAGGAGACATTCTATGTTCCTCAAAGAGGAGGTCTAATTTTCCGTGCGAGAGAGGGGATCAACCAAAGAAGTCTGTCGCTTCGTCGAAAAGGAAAAGAAATTTGCAAAATGATTTTTTGGTCAATAATTTGGAAGATGATGAGGAAACCGTGGTTGCCAAGATAAGGTCCAGGAGAAGAACTCATAAAATGGAGGCCGGGATGGATAAAATAGGCTCAGAATCAAGTGGAGAGAGTTCATCCTCGAGCATTACCGTATCGCATTCTCCACCAGCATCCACGTTGCCTACTTCGGATTCAAGAGACCATATAAAGGACGATTACATTGCAACAAGTTGGAGGGACACTAAGCGAAGTCGCTGGATATGTCATCAATGCATGAAAAGGGATAGACTAAGCTATGTCCCTTGCACCAAATGTGAACAGAAATTGTACTGTGATAAGTGCATCAAGCAATGGTATCCTGATATGACAGTAGCAGAAATTGCTGAGCGTTGCCCATTTTGCCGTAAAACTTGCAATTGTAATGCCTGCTTGCGCTCAAGTGGGATGATTAAGACATCTACAAGGGATATCTCTGACAATGAGAAGTTTCAGCGTCTGCAATATTGCATCAACTTAGTTCGTCCGTTTCTGAGACAAATTTGCGAAGAACAAGCTCTTGAGGAAGAGATTGAAGCCAGTATACAAGGGACATCACGTTCTGAGATTAAGATACTGCAAACTCCTTGCAGTGATGATGAACGTGTCTATTGCAACCATTGTGCTACTTCAATTGTTGACCTTCACCGAAGCTGCCCTGAGTGTTCCTATGAACTGTGCCTCCAATGTTGCCAAGAAGTTCGCAATGGAACTATTTTGCCTAGAGCTGAAATGAGGTTTCAGTATGTGAATAAGGGTTATGATTATATGCATGGTGGTGATCCTCTGCCAGAGTCTTCTGATTCCAAGACCTCAGATGATCCTTGTATTGAGCAATCTATTGAGTGGACTGCAGAAGGCACTGGAAGTGTTTTTTGTGCCCCAAAGGAGTTTGGGGGGTGTGGAAACTGTTTGCTGGAGCTCAAGCATATTCTTCCACGGGGCTGGATATCTGAACTGGAAGCTAAAGCTGGTGATTTGTTGAGAAAATGCGTGACTGTACAAACTTTTCTGAAGCACAAAGAAACAGCAGCATCAAGCTGCAACTACTCTGTGAGAAGAGCTGCTTCTAGAGAAGACAATTATGACAACGACATATACTGCCCTTCTTCAAGGGAGACTATCAATGAGGGGCTATCAATCTTTCAAAGGCATTGGATTAATGGCGAACCTGTCATAGTTCGTGATGTTCTTCAACAAGCAACAGGTTTGAGCTGGGAGCCCATGGTTATTTGGAGGGCAGTATGTGCGGCTTCAGATTCAAAAACCAACCCAAAAATGTCAGAGGTTAAGACTATTGATTGTCTCGCTGGTTGTGAGGTAGAAATCAGCACTCATAAGTTCTTTAAAGGTTATATGGAAGGAAGAACATATAGAAATCTTTGGCCAGAGATGCTAAAGCTAAAAGACTGGCCTCCCTCTGATAAGTTTGAAGATCTTTTGCCTCGCCATTGTGATGAATTTATCTGTTCCTTGCCATTCCAAGAATACACTGATCCTCGGGCTGGTATTCTCAATCTTGCTGTTAAGTTGCCAATGCATGTCTTGAAACCTGACATGGGTCCAAAAACATATATTGCGTATGGAATAAAAGAAGAACTTGGCAGAGGAGATTCCGTAACAAAGCTTCATTGTGACATGTCAGATGCGGTGAATATTTTGACTCATACAGCAGAAGTAAAGTTAAATGATGAGCAAATCTTGTCTATTTCAAAGTTGAAAAGAGCACATAAGGTTCAAGATCAAAAAGAGAAGTGCTGTGCTGAAATCGATGGAAATGTCTCTCCAAATAGCACATTTCTTGATGTCACTGCAGAAAATGAAACAAGAGAAGCAGGTGCTGCTCTCTGGGACATTTTCAGAAGAGAAGATACTGAGAAGTTAGAAACATATTTAAGAAAACACTCAAGAGAATTCAGACATACGTTTTGTTCTCCTGTTGAACAGGTTTTCCATCCCATTCACGATCAATGTTTTTATTTAACAATGGAGCACAAGAAGAAACTGAAGGAGGAGTTCGGTATTGAACCATGGACATTTGAGCAGAAACTTGGGGAGGCTGTGTTTATTCCTGCTGGATGCCCTCACCAAGTGAGAAATCTCATGTCATGCACAAAAGTTGCTGTGGATTTTGTGTCCCCAGAAAACCTCCATGAGTGTCTGCGTTTAACTAATCAGTTCCGGCAGCTTCCCAAGAACCACAGGGCCAGAGAAGATAAACTTGAGATAAAGAAGATGATAGTGTATGCTGCTGACCAGATTCTCAAAGATTTTGAGTCCTTGCTCAAGTGTGCTTGA 2526 0.4212 MEVFCSNVFEVSRRRKVQESHKYTPTSAEEGDILCSSKRRSNFPCERGDQPKKSVASSKRKRNLQNDFLVNNLEDDEETVVAKIRSRRRTHKMEAGMDKIGSESSGESSSSSITVSHSPPASTLPTSDSRDHIKDDYIATSWRDTKRSRWICHQCMKRDRLSYVPCTKCEQKLYCDKCIKQWYPDMTVAEIAERCPFCRKTCNCNACLRSSGMIKTSTRDISDNEKFQRLQYCINLVRPFLRQICEEQALEEEIEASIQGTSRSEIKILQTPCSDDERVYCNHCATSIVDLHRSCPECSYELCLQCCQEVRNGTILPRAEMRFQYVNKGYDYMHGGDPLPESSDSKTSDDPCIEQSIEWTAEGTGSVFCAPKEFGGCGNCLLELKHILPRGWISELEAKAGDLLRKCVTVQTFLKHKETAASSCNYSVRRAASREDNYDNDIYCPSSRETINEGLSIFQRHWINGEPVIVRDVLQQATGLSWEPMVIWRAVCAASDSKTNPKMSEVKTIDCLAGCEVEISTHKFFKGYMEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFICSLPFQEYTDPRAGILNLAVKLPMHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVKLNDEQILSISKLKRAHKVQDQKEKCCAEIDGNVSPNSTFLDVTAENETREAGAALWDIFRREDTEKLETYLRKHSREFRHTFCSPVEQVFHPIHDQCFYLTMEHKKKLKEEFGIEPWTFEQKLGEAVFIPAGCPHQVRNLMSCTKVAVDFVSPENLHECLRLTNQFRQLPKNHRAREDKLEIKKMIVYAADQILKDFESLLKCA 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4296g00046 841 Gene3D Cupin 442 813 - -
Pral4296g00046 841 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 150 218 IPR018866 -
Pral4296g00046 841 ProSiteProfiles Zinc finger RING-type profile. 152 199 IPR001841 -
Pral4296g00046 841 ProSiteProfiles JmjC domain profile. 576 804 IPR003347 -
Pral4296g00046 841 MobiDBLite consensus disorder prediction 42 56 - -
Pral4296g00046 841 SMART cupin_9 557 804 IPR003347 -
Pral4296g00046 841 MobiDBLite consensus disorder prediction 15 61 - -
Pral4296g00046 841 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 47 838 IPR045109 GO:0032454|GO:0033169
Pral4296g00046 841 CDD cupin_RmlC-like 727 776 - -
Pral4296g00046 841 SUPERFAMILY Clavaminate synthase-like 455 826 - -
Pral4296g00046 841 Pfam JmjC domain, hydroxylase 684 787 IPR003347 -
Pral4296g00046 841 MobiDBLite consensus disorder prediction 102 127 - -
Pral4296g00046 841 MobiDBLite consensus disorder prediction 87 130 - -
Pral4296g00046 841 FunFam Transcription factor jumonji domain-containing protein 439 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4296g00046 Pral-Chr4296 261641 274167 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pral4296g00046 JmjC 3e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4296g00046 K15601 - gmx:100797860 1018.84