Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4296g00024 ATGGAGTGGACTAGGGGGCACACCATCGGCCGGGGTTCCACCGCCACCGTGTCGGTCGCTGAGTTTCATGGGTCTGGTCGGATTGTGGCTGTCAAGTCTGTGGAGCTCCAACGGTCGGAATGCCTTAGGAGAGAGCAGAGTATTCTATCCACATTGGAGTGTCCTCATGTTGTTGCCTACGAAGGTTGTGACACCACATTTGAAAATGGTGCGTTCATGTACAACTTGTTCATGGAGTATGCGCCTTACGGGTCGATCGCCGACGAAATTCGCGAGCGTGATGGTGGGTTAGATGAGTTTATGGTTGGACATTATGCTCGTCAAATTCTGCTTGGGTTGGACTACTTACATTCCAATGGGATTGTGCATTGTGATTTGAAAGGCCAGAATGTTTTGCTCACTGATGAAGGGGCTAAAATTGCTGACTTGGGTTGTGCCCGGAGAGTTTCGGCGGAGCAGAATTATGGTGGGGTGATTGCCGGCACCCCGGCGTTCATGGCACCAGAGGTGGCGCGAGGGGAGCAGCAGGGGTTCCCTGCCGACGTGTGGGCTCTTGGCTGTTCTGTGCTGGAGATGATCACCGGAAAAGCACCGTGGCATGACATTTCCGACCCGGTGAGTGTCCTCTATCGAGTAGGGTTCTCCGGCGAGGTACCGGAGATTCCAAGCTTCTTGTCGGAGCAAGGGAAGGATTTTCTCACCATGTGCTTGAAAACAGATCCGAACGAGAGGTTGTCAGCAGGTGAACTTCTCAAACACGAGTTCGTTCAGGATTCAAACACAGCGTCGAAGAAATTTGATGAGCCTAGTTCAAATTCCCCAACTAGTGTGTTGTTGGATCGAGATATCTGGGACTCGTTTGACGAGCTGCAGAAAACCCAAACACCGGATCTGAACCCGACCCCGACCCATGGTCCCGCCTTCTCCTGGGATCCTCCTGGCCCCAGAAGTAGAATTCGTCGGTTGTCTTCTTCTATGCCCAATTGGGAATGTGATGACGAATGGATCACAGTAAGAGACAGCAGCATCAATGGCGGAGAATCTAATGAAGAAACAGAGAATTATGGATTAGACAGTTCAAATTACATTAGAGAGGACAATTATTTCATTGTTATTGGTGAACCCAGAACAATTAGTACAGTTGGATTGAGCGAGTGTTGTAATATTAATGATTATTTCTGCATCAGAGAATCTTCATTAGGAAATTCGCAATGTATAAATATGGCTGCCAATAGAAATATATTGCATGACTTGCTTTCAGTTTTCCCTCTCTCTAATCCTACTTTTGGAAGCATAATTTTCTGTTGCCTGTTGCTTCTACAGTAG 1326 0.4827 MEWTRGHTIGRGSTATVSVAEFHGSGRIVAVKSVELQRSECLRREQSILSTLECPHVVAYEGCDTTFENGAFMYNLFMEYAPYGSIADEIRERDGGLDEFMVGHYARQILLGLDYLHSNGIVHCDLKGQNVLLTDEGAKIADLGCARRVSAEQNYGGVIAGTPAFMAPEVARGEQQGFPADVWALGCSVLEMITGKAPWHDISDPVSVLYRVGFSGEVPEIPSFLSEQGKDFLTMCLKTDPNERLSAGELLKHEFVQDSNTASKKFDEPSSNSPTSVLLDRDIWDSFDELQKTQTPDLNPTPTHGPAFSWDPPGPRSRIRRLSSSMPNWECDDEWITVRDSSINGGESNEETENYGLDSSNYIREDNYFIVIGEPRTISTVGLSECCNINDYFCIRESSLGNSQCINMAANRNILHDLLSVFPLSNPTFGSIIFCCLLLLQ 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4296g00024 441 ProSiteProfiles Protein kinase domain profile. 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4296g00024 441 Gene3D Transferase(Phosphotransferase) domain 1 2 298 - -
Pral4296g00024 441 SUPERFAMILY Protein kinase-like (PK-like) 3 314 IPR011009 -
Pral4296g00024 441 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4296g00024 441 MobiDBLite consensus disorder prediction 292 315 - -
Pral4296g00024 441 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 294 - -
Pral4296g00024 441 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Pral4296g00024 441 CDD STKc_MAPKKK 2 256 - -
Pral4296g00024 441 SMART serkin_6 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4296g00024 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4296g00024 Pral-Chr4296 153812 155137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4296g00024 3 339 MAP Kinase Kinase Kinase AT5G55090 48.105 3.40e-100 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral4296g00024 Pkinase 5.6e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4296g00024 K20716 - qsa:O6P43_031265 435.261