Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4296g00003 ATGAGTGAATCAAATCGCCAGACAAATGGCAGAGAGACTAGATCAGGACAGAAGGACGCCAAGCAGCTGCAATTCTCTGAAGATGAAGAATTTCTCATTGCCAGGATGTTTAGCTTGGTTGGAGACAGATGGGCCATTATAGCAGGGAGAATCCCAGGGAGGAGCGCGGAAGAGATTGAGAAGTATTGGACCTCTAAGTGCGGTTCGTCAAGTGAGACCTCGCGTCATCGCGCTGCGTGA 240 0.5 MSESNRQTNGRETRSGQKDAKQLQFSEDEEFLIARMFSLVGDRWAIIAGRIPGRSAEEIEKYWTSKCGSSSETSRHRAA 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4296g00003 79 ProSiteProfiles Myb-like domain profile. 17 67 IPR001005 -
Pral4296g00003 79 CDD SANT 25 63 IPR001005 -
Pral4296g00003 79 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 12 68 - -
Pral4296g00003 79 MobiDBLite consensus disorder prediction 1 22 - -
Pral4296g00003 79 Pfam Myb-like DNA-binding domain 24 63 IPR001005 -
Pral4296g00003 79 Gene3D - 24 79 - -
Pral4296g00003 79 SMART sant 21 69 IPR001005 -
Pral4296g00003 79 FunFam MYB-like transcription factor 24 66 - -
Pral4296g00003 79 SUPERFAMILY Homeodomain-like 23 65 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4296g00003 Pral-Chr4296 20467 22106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4296g00003 17 65 MYB Transcription Factor Family AT1G22640 44.898 6.27e-13 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4296g00003 Myb_DNA-binding 7.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4296g00003 - - twl:119988640 92.8189