Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4284g00005 ATGTGTGGAATACTTGCAGTCTTGGGCTGCATTGACAACTCTCAGGCCAAGCGTTCTCGTATAATCGAATTGTCTAGGAGGTTAAGGCATCGGGGTCCTGATTGGAGTGGCTTGCATTGCCATGAAAACTGTTATCTTGCCCATCAACGTCTGGCTATCGTCGATCCTACCTCAGGGGATCAACCTCTATATAATGAAGACAAGAGTGTCGTTGTTACTGTAAATGGAGAGATATACAACCATAAAGAATTGAAAAAACTGACTTCTCACCAATTTCGCACTGGAAGCGACTGTGAAGTGATTGCCCACCTTTATGAAGAATATGGTGAAGAATTCGTTGACATGTTGGATGGCATGTTCTCTTTTGTCCTTCTAGACACTAGAGATAAAAGCTTCATTGCAGCTCGTGATGGTATTGGGATTACCCCTCTTTACATGGGCTGGGGTCTCGATGGATCTATATGGTTTGCATCTGAAATGAAAGCTTTGAGTGATGATTGTGAGAGATTTGTATCTTTTCCTCCAGGGCATTTATATTCCAGCAAACAGGGAGACCTAAGAAGGTGGTATAATCCCCCTTGGTATTCGGAGAATATTCCTTCGACTCCATACAATCCTCTGGCTTTGCGTGAGGCATTTGAGAAGGCTGTAGTTAAGAGACTTATGACTGATGTACCATTCGGAGTTCTGTTGTCTGGAGGACTAGATTCATCACTGGTTGCCGCTGTTGCCAACCGTCATTTGGCTGAATCTGAAGCTGCTCATCAGTGGGGATCACAGCTACATACCTTTTCTGTTGGTCTAGAGGGCTCGCCAGATTTGAAAGCTGCCAGAGAGGTAGCCGATTATATTGGTACCCGTCACCATGAATTTCATTTCACCGTTCAGGAAGGTATAGATGCGCTTGAAGAAGTCATTCACCATATAGAAACATATGATGTAACGACTATCAGAGCGAGCACTCCTATGTTCCTTATGTCTCGAAAAATCAAATCGTTGGGAGTGAAAATGGTTCTTTCTGGGGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTACTTCCACAAGGCACCTAACAAGGAAGAATTTCACCAAGAAACATGTCGAAAAATTAAAGCACTACATCTTTATGACTGCCTGAGAGCCAATAAATCAACTTCAGCATGGGGTTTAGAGGCTCGTGTACCATTCTTAGATAAAGAATTCATCAACGTAGCCATGAGCATAGATCCAGAGTGGAAAATGATAAGGACTGATATTGGAAGGATAGAGAAGTGGATCCTACGCAATGCATTTGATGATGATCAGAAGCCATATCTACCTAAGCACATATTGTATAGGCAGAAGGAACAGTTCAGTGACGGTGTTGGGTACAGCTGGATTGATGGCTTGAAGGAGCATGCCAACAACCTAGTCACAGATGCAATGTTAATGAATGCAAGTTTTATTTATCCAGAAAACACTCCTACCACGAAAGAAGCATACTTCTACAGAACAATTTTTGAGAAGTTCTTCCCTAAGAATGCTGCTAGGTCAACAGTTCCCGGAGGCCCTAGTGTGGCATGCAGTACCGCAAAAGCTGTGGAATGGGACGCAGCGTGGTCAAAAAATCCTGACCCTTCTGGTCGGGCTGCACTTGGCGTTCATGAGGCAGCATACGAGGAAGCAAAAGTTGCCAAACCGATCAATGGCGCCCACTAA 1701 0.4386 MCGILAVLGCIDNSQAKRSRIIELSRRLRHRGPDWSGLHCHENCYLAHQRLAIVDPTSGDQPLYNEDKSVVVTVNGEIYNHKELKXKLTSHQFRTGSDCEVIAHLYEEYGEEFVDMLDGMFSFVLLDTRDKSFIAARDGIGITPLYMGWGLDGSIWFASEMKALSDDCERFVSFPPGHLYSSKQGDLRRWYNPPWYSENIPSTPYNPLALREAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVANRHLAESEAAHQWGSQLHTFSVGLEGSPDLKAAREVADYIGTRHHEFHFTVQEGIDALEEVIHHIETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGLEARVPFLDKEFINVAMSIDPEWKMIRTDIGRIEKWILRNAFDDDQKPYLPKHILYRQKEQFSDGVGYSWIDGLKEHANNLVTDAMLMNASFIYPENTPTTKEAYFYRTIFEKFFPKNAARSTVPGGPSVACSTAKAVEWDAAWSKNPDPSGRAALGVHEAAYEEAKVAKPINGAH 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4284g00005 567 PIRSF Asn_synthetase_glu-h 356 515 IPR006426 GO:0004066|GO:0006529
Pral4284g00005 567 PIRSF Asn_synthetase_glu-h 1 362 IPR006426 GO:0004066|GO:0006529
Pral4284g00005 567 Pfam Asparagine synthase 210 511 IPR001962 GO:0004066|GO:0006529
Pral4284g00005 567 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 3 192 IPR029055 -
Pral4284g00005 567 FunFam Asparagine synthetase [glutamine-hydrolyzing] 195 514 - -
Pral4284g00005 567 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Pral4284g00005 567 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Pral4284g00005 567 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Pral4284g00005 567 FunFam Asparagine synthetase [glutamine-hydrolyzing] 2 192 - -
Pral4284g00005 567 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 202 484 - -
Pral4284g00005 567 Gene3D HUPs 195 514 IPR014729 -
Pral4284g00005 567 PANTHER ASPARAGINE SYNTHETASE 1 555 - -
Pral4284g00005 567 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Pral4284g00005 567 CDD AsnB 2 192 IPR033738 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4284g00005 Pral-Chr4284 26910 31760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4284g00005 61 164 PRT Gene Family AT4G38880 37.069 1.53e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4284g00005 K01953 - tcc:18611569 1071.23