Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4283g00046 ATGAATTCTCCATCCACACAGTTTGTTTCCTCAAGAAGGATGGGTGTTTATGATCCAATTCAACAGATTAACATGTGGGGAGAAAATTTCAAAAGTAATGTTAATTTAAGTGCCTTAATTGGTGAAGCAGATGGGAAGTTCATAAATCAGCCAGAGGATGCTTCTCATAACACATTGGGTACGTCCAAGATGTATGGCCAAGAAGCTCATAGACCTATTGATAAGATACAAAGACGTCTTGCACAAAATAGGGAGGCTGCTCGTAAGAGTCGTCTGCGGAAAAAGGCCTATGTGCAGCAATTAGAATCAAGTCGTTTGAAGCTGATGCAGTTGGAACAAGAGCTCAACCATGCAAGACAACAGGGATTATATATGGGCGGGGCATCAGATTGTAATAATCTGGGTTTTACTGGAACTGTTAATTCAGGTATTACAACCTTTGAGATGGAGTATGGACACTGGGTTGAAGAGCAAAATAGACTAGTTTGTGAACTAAGGGGTGCTTTAAATGCTCATATTAGTGACAATGAGCTCAGGATAATTGTAGATAGTATAATGAATCACTATTTTGAGCTCTATCGAAAGAAGTCTGCTGCTGCAAAAGCAGATGTTTTCTATGTGATGTTTGGTATGTGGAAAACTACAGCTGAGCGGTTTTTCATGTGGATTGGAGGCTTTCGCCCCTCTAAGCTTCTAAAGGTCATTGTCCCTCTGATTGAACCCTTGACAGAGCAACAACGGTTTGACATCTCTAACCTCGAACAATCTTGCCAGCAAGCAGAAGATGCCCTTTCTCAAGGTATGGATAAACTCCAGCAAACACTTGGCGATACTATAGCAGCGGCTGGACCGCTAGTTGAAGGGCCTTATATTCCTCAGATGGCTGCTGCAATGGAGAAAATGGAAGCTCTCGTGAGCTTTGTAAACCAGGCTGATCATCTTCGTCAGGAAACATTGCAGCAAATGTTTCGGATGCTAACAATACGTCAGGCTGGTCGATACCTGCTCACCGTAGGTGAATATTTCCAGCGCCTACGAGCCTTGAGCTCACTTTTGGCCAGTCGTCCTCGGGAACCAGCTTAG 1083 0.4331 MNSPSTQFVSSRRMGVYDPIQQINMWGENFKSNVNLSALIGEADGKFINQPEDASHNTLGTSKMYGQEAHRPIDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLMQLEQELNHARQQGLYMGGASDCNNLGFTGTVNSGITTFEMEYGHWVEEQNRLVCELRGALNAHISDNELRIIVDSIMNHYFELYRKKSAAAKADVFYVMFGMWKTTAERFFMWIGGFRPSKLLKVIVPLIEPLTEQQRFDISNLEQSCQQAEDALSQGMDKLQQTLGDTIAAAGPLVEGPYIPQMAAAMEKMEALVSFVNQADHLRQETLQQMFRMLTIRQAGRYLLTVGEYFQRLRALSSLLASRPREPA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4283g00046 360 Coils Coil 250 270 - -
Pral4283g00046 360 CDD bZIP_HBP1b-like 75 127 - -
Pral4283g00046 360 SMART brlzneu 71 131 IPR004827 GO:0003700|GO:0006355
Pral4283g00046 360 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Pral4283g00046 360 Gene3D - 74 123 - -
Pral4283g00046 360 Pfam Seed dormancy control 162 236 IPR025422 GO:0006351|GO:0043565
Pral4283g00046 360 PANTHER TRANSCRIPTION FACTOR TGA9 1 358 - -
Pral4283g00046 360 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 115 IPR004827 GO:0003700|GO:0006355
Pral4283g00046 360 SUPERFAMILY Leucine zipper domain 75 116 IPR046347 GO:0003700|GO:0006355
Pral4283g00046 360 Coils Coil 94 121 - -
Pral4283g00046 360 Pfam bZIP transcription factor 75 108 IPR004827 GO:0003700|GO:0006355
Pral4283g00046 360 ProSiteProfiles DOG1 domain profile. 144 355 IPR025422 GO:0006351|GO:0043565
Pral4283g00046 360 FunFam BZIP family transcription factor 74 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4283g00046 Pral-Chr4283 345338 351213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4283g00046 1 360 Calmodulin-binding Proteins AT5G65210 65.583 5.61e-175 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4283g00046 DOG1 2.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4283g00046 K14431 - gmx:100793353 535.413