Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4280g00008 ATGGAGGGCATCGGTGCGGAAATTGCAAAGAATGAGGTCCAAAGTTTAGTAAATTTTGTCAAAGGCGAAGTTCGATATTTATGTTGTTTTCACAATTATGCTGCAACATTTGATAAGAAAAAGGAAGAACTAAAAGCAAAGCTCCTAGATGTAAATAGAATTATAGAAAAAGCCAGAGGTGTTTCTAGGGTTACAGATGAAGCACTACAATGGACACGGGAAGCTGGAAGTCTCATTGAGTGTGACACTAGAAAAGAGAAATGCTTTAATGATAAGTGTCTTAATTGCTGGCAACAATATCGGAAAGGCAAAGACATGGAGGAGAAGACACAACAGATTGACAGACTTTTGAAAAGATGTAACTTTAACATAGTGGCAGGGGCAGCTGATTTTCCTAGCATAAAATACCAATCTTCACAGGATTTCATGCATTTTGAGAGCAGAAAGTCACAGTTTCAAGATCTAAAAAAGGCACTAGAAGATGAAAATTGCAATATGATCGGATTGCATGGCACTGGGGGAACAGGCAAAACCTCAATGGCATTACAAGTGGCTGCTGAACTCGGAGGATCCAAATTTGACAAAGTCATCTTTCTTGTTGTCTCTCAGCTTCTAGATTTCAAAAAGATTCAACATGATTTGGCAAAAGATCTTGATTTGGAATTAAAGGAAGGAAAGGAAGAAGAACATGCAAAGAAAATATGGTCCAAAATCACTAATATGAAAGAGAGGCTTCTTATAATCCTAGATGATGTATGGGAAGAGCTTGATCTTATACAAAAGTTGGGAATCCCATCTAGTCACCAACACATGGATTGCAGTGTATTAATAACCACACGTAATCCACATGTTTGTTCATTAATGAAGTGCCAAAAATTGATTCAAGTTCAGATATTGACTGACAATGATGCATTGGATCTTTTCCTAGCACAGGCTAGCATTAATGGTTCCTCTAGTGGTTTGAGGGTTGTGGCAGAAAAAATTGTGGAGAAATGTGGAGGAGTACCAGTTGCAATTGTAGCAATAGCAAGAGCATTAAAAAATCGGCCTTTATTTGCTTGGACAGATGCTTTGAAAGCTTTGGAATCCAATGATATTAAGCAAGGTTTGACAGAGGCTTATAAATGCCTGAAATTGAGCTATGATTACTTGAAAAATGAAAAAGCCAAAGAAATATTTGTCATATCTTCTTTGTTCCCAGAAGATTTTCAAATTTCTATACAAATTTTAAGCAAATTTGCTATAGGATTAGGCCTTTTTGGAGAGGTGGACAGGTACCATTCAGTAAGAAGCAAAGTGGGTGAAGCCATACTAGAAGTGATCGATTCTTCTTTATTGTTGACTGACAATGAAGAATGCATGAAGATGCATGATTTGGTTCGTGAAGTAGCTTTATGGATAAGAGAGAAAGATACTCAATGGATCATGGATCTTAAAAAGCCTATAAAACAGAACTTGCGGTATTTGGTTTGGAAGAATGATGGTTTTCCTGGTAAATTCGATGGAAAGAACCTAGAAATTTTAATGATATTTCTAGGTGGTTCAAAGAATTTGGAAGTACCTGATACATTTTTTGTAGAGATGATGAGGCTGAAAGTTTTGTATTTAGCAAGTGATGAACAAATTTCAGTTCCAACACTAATATATTCATTTCGATCATTAAAGGATGTTCGGACTCTCAACCTATTGAATTTGAAATTAGGCGACATCTCCTTGCTAGGAAACTTACATAGGCTTGAGAGTCTTTGGTTATTTGATTGTTCAATCATTGAGCTACCAAAAGAAATTTTAAACCTAAACAAGTTGAGGTTGTTGGAGGTAGATAAATGTGAAATTGAAAAGAACAATCCTTTTGAAGTGATTGGAAAATGCTCCCAACTGGAAGAATTGAGCTTTGTAGGAAATCAGGTTGACATAAAAGAAGCATGTGTTGTTTTTGAAAATTTATCTCCTTCTACGTTACATAGATATAAAATATCTTGGTGGAATCTTGAAAGGATTCGGGGAATAGAAAAGTATGGTTTCATATCAAGATGGTTTTACCCATGTGATTGGCGGAATCTAATTTCAGAGGCAACATTCAAGCAATTTGTACGAACTGCCGAGCTTCTTATATTAGGAGGGTGTAAAGAAACAAGATGGAAGAATCTTGTCCCTGATATTGTTCCAGTGGAAGAAGGAGGCATGAATGATTTAATTGTTCTTCGTTTGTATTCTTGGCCTGACATGCAGTGCCTCATTGACAGTAAGAATCATGAAACTAATGTGACTACTTTCTCCAAGTTAGTTGAACTAAATCTCAAAGAGATGGATGTTGAAGATTTATATCGAGGTTCTTTGCCGTCTGGCTTTCTAGAGCAATTAGAGACTATGAGGTTGACGAAGTGCCAAAAATTGAGAAATATATCATTTGATGGCAAGTTGAGCCTGTGTCATCTTAAGGTCATGGAATTGAATGCTTGTCCAAAATTGACATCAATTTTTCAATCATTCACCGCTCAGAGTCTCACGCAATTGGAAACACTAAGTATTGAGAATTGTGATTCCCTAGAACACATCATAGCATATAAGAGCTCGGAAGGAGAAATAGCGGGTGGTGATAATGAAGAGAAGAGTTATGAGTCATTGTTCCCAAAATTAAGAACTCTTCAAATTAAACGATGTGGAAGATTACGAATGATCTTGCTAGTTCTTTTCGGCGGAGCTCTTGCATCCTTGGAAGAGATAACGATAAGTGACTGTGAGCAGCTGAGTTATATATTTGATAAGTTCCAAAATGGAGACCATACTATGCTGCCCTCACTAAAGAAAATGGAACTTTCTCAAGTACCAAGTTTCATCAGCATTTTTCGAGAATATCACAAATCCGTGTCTTTGTCAATGCAAAAGCCATCACCTCCAATTTTGAGAACAAAGACATCTGCATTCTCTTGGGCTCCAATGTGTTGTTTTGGGCATAAATCGAGTGAAGAGACCAACGTCGCCGTGTGTAAGGACAGAGTTCCGAACGACGCAACACAACAGGGATCATCATTTACATCCAAGACATGGTTTGAAACTTCTGGAATCATTCTGAGACAACTATATTTCAATGTCGGTCATATCAAGAAGTTGAAATTGGCACAAGTGTCTTTAAATTCGGTATCATTATTTACTTTATCCATGGCCTCGTTGATATTGTGGGAAGAGCTCACAGTTAAAGGATGTGATGGATTGAAGAACTTGATAACAATGGAGGAAGATGATTATAATGATAAGATGATGATGAGTTGCCACTCTGTTTTTCCGAAGTTAGAGAAACTAGAAATCTTGGAGTGCAAGGACTTGCAATTTTTATTTCCATCTTCAATATCTATAGGACTTCAAAATTTGAAGTCATTGATGGTCCAGAATGCTCTTGAGTTAAAATATGTTGTTGGAAAATACCATCATGTGGATCATCAATCAAATCAAAATCATAACGTTGAGCTTCACTTTGATCTCCCGAATTTAGTGTCACTCTGCCTTGAAGATGTACCAATGCTTATCAGCATTTTTGCAATGAATTATAACTTGGCATGGCCTTCTCTAGAGGATGCTACTTTGGAGAATCAGAACGCTGAATCTTTTACTGATGATTTGCTGGTTTGCCTAGAAGGACAACCAAACAAGAAAACCATCAAGGAATTAGATACATCTAAAAATGTGATGCCTCCTATTCGAGCAACTCGGTGCCTTTCAATACAATCATTGAATAATATTAAAAAGATGACTCTCTTGAATTTTTCCAACTCAAAGACATTGTTAACGCTACCAATGGCCGCCATGGTTCTGTGGGAAGATTTGACAATTGAAAGATGTGAGCAACTAAAGTACATTGTGGCGGATGAGGGAGAAGTTGGAGCTCTCATGAATCACAGATCCATCTTTCCAAAGTTGAAAGTGTTAAGGGTTTCAAATTGTGATGCACTGGAATATCTATTTCCAGCATATGCATTCAGATCACCCTCACATCTGAAATCTCTATCTATTTGGAATGCTTCTGAGTTGAAATATGTGTTTGGAACAAGCCATCATGAGAATCAAAATATCCAAACTTACATTGATTTCCCTGTTCTGAAATGGTTAAATTTTGAATCCCTACCAAGGCTCGTGAGCATTTATCCAAAAAATTATTACTTGAGAGGCCTATCTTCTCTAAAATCATTTTATTTGGAAGTGGCTCCAGAGTTTAATATTACATCTTTTACTGATTTCACGGTTCATGCACTTGGAGGACAACAGGATTCCACCCCTGCACAGGCAGCGCAGATGCTCTTGCAATCTGTAGAGATGATTGTATTTCGTGAATCTAAAATAGAGGAGATTTTCAATTTAATACATATGGACACAGGGGAAAAAGGGGAAGGACGTGAACCACTGACATCAACCTTAGATTGGTTGGTGTTGGAAAGTTTAAGTGAGTTGAAGAATATATGTGTGGGTCCCAAATATATGCTTAGCCTCAACAACATTTCAGAATTGGACATCAAAGGATGCAACAAGCTTAAAGTTATCTTCTCGAACTCTATACTGAAGAGCCTACCGAACTTGGAGGGGCTGACGATATCATCATGCAAGGAGTTAACTCACATCATTGAGGAAAATGCTGATGATGATCATTTGTGTCGTGAACCATGCTTTCCAACCCTATCTGATCTGACGGTTGAAGGTTGTGACAAGTTGAGATACTTGTTCTCAATCACAGTTTCTGGTATCCTTCCAGATTTACAAGTTTTGAGTATAAAAGAATCTTCCAACCTTGAGCATATATTGATCAGACAAGATGAGACAAAAGAGATGGGGATGATGGAAGTGCTTCCCAAAATTAAATATCTAACCCTTGAAAAGCTTCCAAGCCTCGTCAGTATCTGTAATGAAGTTGATTTTCGAAATCTGGAAGAATCCTCTGAAGTGAATGATTGTCCTCGATTTTCTTTCTACGAAACTACAACTCCTCCTCAGGTTCCAGAACAGCTTTCCTCGCATGTAAATATGGGAGACGTCAAAGAGAAACGAGGCTTGGAAGCAGAACAATCCCCAACTATTTCACCAGAGGATGAGTTGGTTGGAAGAAAATTGATGAAAAATAAAGAAATAATTAAGAATCCACAACAATCAATAGTTGGTGCACCAGACATCACAAAGAATGAAGAATTCGTTGGCAAAGGAATGAAAAATGGAAAAACTATGATGGATCCACAACAACCCACAAATGGCACATCAAAATCGACAAAGATTGTTGAATCAAAACCTGAAGAATGTATTTCAACAGAGACCATACGTCCAAGCTCCCTAACTTCTAAAACGCAGAAGGTACCTGTTCCTATGAGTCCAAGATTCGATGTCCTTTCGGTTGGAGGCATCACCAGCAAAAATATTGAAATTTTTGAAGAGGAAGAGGAAGAGGAAGGTGGCTTAATAGCTACCAGGAGACAGAGAAGTAGAATGAAGGCAGAGGATTCTTCGTCAAGAAAAGAGCACGAGACTTCTCTTCATGGTGAACCTTCTGTGCCACCCTTACCAGCAAGTCCCAGGCAAATTCCTTCATCTACTCCTTCCATGTCCACTTATGGGATTGAACCTTCTTTTTATGACGCCAACAATGCTTTGAGTGTTCCTGGGGTGAAAGAGATAGTTGATATGATGAAACTAGAGGGTGCTGAGAGTTCCATGCTGGCAGAGGCATTCAAAAGTCACCCACACCTACACCTTTCTTCAGAGTACCGAAGCACTGAGTTGTTGTGCTTCTCTTACAGGGTTCTGCTAAATATCTTGAACATTTTGGCAACCAGGAACCCCTTCACTATCACTGAGGCAGACAACAGATTGTTGGCAAAATATCTAAATGATGCTTCTGTTCTAGGCTTTGACAAAGATTGGCTTCAGTCTGTCAGAATCAAGGTTTTCAGTTACGATGGATCTGAAGTTCAGCCCATGCAACAAGTTCTAAAGGATCTGGGCAATAAGCTCCAGAGAAAAAAGGCAGAACTTGCAAAAGTTGCACAATTAGCAGAAATGGCTCAGAAAGAGTTAGAGGCAGCTCAATCCCATTTTGACATTGCACAGCAAGAGCATGCAAATACTAGGGAACTTCATTCTCAACTTCTCCAGGAATGCCAAGAAATTCTGGAACAACGAGATCAATGTTGGGAAACAATTGCTGCAAAATATAGGCCTTTTGGATTTTAG 6210 0.3821 MEGIGAEIAKNEVQSLVNFVKGEVRYLCCFHNYAATFDKKKEELKAKLLDVNRIIEKARGVSRVTDEALQWTREAGSLIECDTRKEKCFNDKCLNCWQQYRKGKDMEEKTQQIDRLLKRCNFNIVAGAADFPSIKYQSSQDFMHFESRKSQFQDLKKALEDENCNMIGLHGTGGTGKTSMALQVAAELGGSKFDKVIFLVVSQLLDFKKIQHDLAKDLDLELKEGKEEEHAKKIWSKITNMKERLLIILDDVWEELDLIQKLGIPSSHQHMDCSVLITTRNPHVCSLMKCQKLIQVQILTDNDALDLFLAQASINGSSSGLRVVAEKIVEKCGGVPVAIVAIARALKNRPLFAWTDALKALESNDIKQGLTEAYKCLKLSYDYLKNEKAKEIFVISSLFPEDFQISIQILSKFAIGLGLFGEVDRYHSVRSKVGEAILEVIDSSLLLTDNEECMKMHDLVREVALWIREKDTQWIMDLKKPIKQNLRYLVWKNDGFPGKFDGKNLEILMIFLGGSKNLEVPDTFFVEMMRLKVLYLASDEQISVPTLIYSFRSLKDVRTLNLLNLKLGDISLLGNLHRLESLWLFDCSIIELPKEILNLNKLRLLEVDKCEIEKNNPFEVIGKCSQLEELSFVGNQVDIKEACVVFENLSPSTLHRYKISWWNLERIRGIEKYGFISRWFYPCDWRNLISEATFKQFVRTAELLILGGCKETRWKNLVPDIVPVEEGGMNDLIVLRLYSWPDMQCLIDSKNHETNVTTFSKLVELNLKEMDVEDLYRGSLPSGFLEQLETMRLTKCQKLRNISFDGKLSLCHLKVMELNACPKLTSIFQSFTAQSLTQLETLSIENCDSLEHIIAYKSSEGEIAGGDNEEKSYESLFPKLRTLQIKRCGRLRMILLVLFGGALASLEEITISDCEQLSYIFDKFQNGDHTMLPSLKKMELSQVPSFISIFREYHKSVSLSMQKPSPPILRTKTSAFSWAPMCCFGHKSSEETNVAVCKDRVPNDATQQGSSFTSKTWFETSGIILRQLYFNVGHIKKLKLAQVSLNSVSLFTLSMASLILWEELTVKGCDGLKNLITMEEDDYNDKMMMSCHSVFPKLEKLEILECKDLQFLFPSSISIGLQNLKSLMVQNALELKYVVGKYHHVDHQSNQNHNVELHFDLPNLVSLCLEDVPMLISIFAMNYNLAWPSLEDATLENQNAESFTDDLLVCLEGQPNKKTIKELDTSKNVMPPIRATRCLSIQSLNNIKKMTLLNFSNSKTLLTLPMAAMVLWEDLTIERCEQLKYIVADEGEVGALMNHRSIFPKLKVLRVSNCDALEYLFPAYAFRSPSHLKSLSIWNASELKYVFGTSHHENQNIQTYIDFPVLKWLNFESLPRLVSIYPKNYYLRGLSSLKSFYLEVAPEFNITSFTDFTVHALGGQQDSTPAQAAQMLLQSVEMIVFRESKIEEIFNLIHMDTGEKGEGREPLTSTLDWLVLESLSELKNICVGPKYMLSLNNISELDIKGCNKLKVIFSNSILKSLPNLEGLTISSCKELTHIIEENADDDHLCREPCFPTLSDLTVEGCDKLRYLFSITVSGILPDLQVLSIKESSNLEHILIRQDETKEMGMMEVLPKIKYLTLEKLPSLVSICNEVDFRNLEESSEVNDCPRFSFYETTTPPQVPEQLSSHVNMGDVKEKRGLEAEQSPTISPEDELVGRKLMKNKEIIKNPQQSIVGAPDITKNEEFVGKGMKNGKTMMDPQQPTNGTSKSTKIVESKPEECISTETIRPSSLTSKTQKVPVPMSPRFDVLSVGGITSKNIEIFEEEEEEEGGLIATRRQRSRMKAEDSSSRKEHETSLHGEPSVPPLPASPRQIPSSTPSMSTYGIEPSFYDANNALSVPGVKEIVDMMKLEGAESSMLAEAFKSHPHLHLSSEYRSTELLCFSYRVLLNILNILATRNPFTITEADNRLLAKYLNDASVLGFDKDWLQSVRIKVFSYDGSEVQPMQQVLKDLGNKLQRKKAELAKVAQLAEMAQKELEAAQSHFDIAQQEHANTRELHSQLLQECQEILEQRDQCWETIAAKYRPFGF 2069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4280g00008 2069 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 393 IPR027417 -
Pral4280g00008 2069 SUPERFAMILY L domain-like 1141 1632 - -
Pral4280g00008 2069 SUPERFAMILY L domain-like 455 950 - -
Pral4280g00008 2069 MobiDBLite consensus disorder prediction 1806 1861 - -
Pral4280g00008 2069 SUPERFAMILY RNI-like 1479 1624 - -
Pral4280g00008 2069 MobiDBLite consensus disorder prediction 1811 1839 - -
Pral4280g00008 2069 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1439 1570 - -
Pral4280g00008 2069 Gene3D Ribonuclease Inhibitor 1433 1651 IPR032675 -
Pral4280g00008 2069 Gene3D Ribonuclease Inhibitor 870 963 IPR032675 -
Pral4280g00008 2069 PRINTS Disease resistance protein signature 166 181 - -
Pral4280g00008 2069 PRINTS Disease resistance protein signature 834 850 - -
Pral4280g00008 2069 PRINTS Disease resistance protein signature 239 253 - -
Pral4280g00008 2069 PRINTS Disease resistance protein signature 332 346 - -
Pral4280g00008 2069 MobiDBLite consensus disorder prediction 1732 1763 - -
Pral4280g00008 2069 Pfam NB-ARC domain 152 382 IPR002182 GO:0043531
Pral4280g00008 2069 Gene3D Ribonuclease Inhibitor 495 859 IPR032675 -
Pral4280g00008 2069 Gene3D - 134 298 IPR027417 -
Pral4280g00008 2069 Gene3D - 299 385 IPR042197 -
Pral4280g00008 2069 Gene3D Ribonuclease Inhibitor 1014 1418 IPR032675 -
Pral4280g00008 2069 MobiDBLite consensus disorder prediction 1737 1752 - -
Pral4280g00008 2069 Coils Coil 1990 2031 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4280g00008 Pral-Chr4280 136709 189970 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4280g00008 167 473 WRKY Transcription Factor Family AT5G45050 27.245 4.61e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4280g00008 - - pcin:129313598 1739.93