Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4280g00001 ATGGAGAGCATCCCTGTTGAACTTGTAAAGAATGAAACCCAAAGTTTAGTGAACTTGGTGAAAAATGAAGCTCAATATATATGTTGCTTCAATAGTTATGTTCAAGAGTATGAGCAGGCAAAAGGAAGATTGAAAGCAAAACTCGAAGATGTAAGCATAAAAATTAATCAAGCTAGAGGTGTTTCTCTTGTCACATCTGTAGCACTACAATGGACACGTGACGCTGAAGAACTCATTAATGTTGACACTAAGAAAGAGAAATGCTTTAATGATTTGTGTCTTAATTGCTGGCCTCAATATCAGAAAGGTAGAGACTTGGCGAAGAGGACTCTGGATATTGACAGACTTCTAAAGATATGTAACTTTGATATAGTGGTAGGTCTAACTGATCTTCCAGGTATAAAATACCATTGCTTACCAAATTTCACGCATTTTGAGAGCAGAAAGTCAATATTTAAAGAACTTCAAAAGGCACTAGAAGATGAAGGAAACAATATGATTGGACTCGAAGGCTTAGGGGGAACAGGCAAAACTTCAATGGCAACAGAAGTGGGTGCTGAATTGGAAGGATCCACATTCGGCAAAGTCATCTTTCTTGTTGTCTCTAAGCTTCCAGATTTCAAACATCTTCGAGGTGAGATTGCTGGACGTTTGGATTTGAAATCAGAGGATGGAGAGTACCACGAAAAAATATTGACCAAAATCAAAGCGTTAAAAGAGAAACTTCTTATAGTACTAGATGATGTGTGGGTGGAGTTTGATCTCAGGAAAGAGTTGGGGATTCCTCCTCCTCACCTGCACAAGGGTTGCACTATATTGATAACCACCCGGAGCAAAGAGATTTGTACAAAAATGGATTGTCAAAGGATCATTCATCTACAGGCACTGACTGATAAGGAAGCATTGCAACTTTTCCTCGAGCATGCTAATAGCTCCTCTACTTTGGAGAATTTGGCGCAAAAAATTGTGAAGCATTGCCATGGAGTACCAGTTGTAATTGTAGCTGTAGCAAGATCATTGAAAGATCGACCTTTTAAAGTTTGGACGGAAGCCTTGAGGAACTTGCAAAGTGGTGAGTCAATATTCAATGTTCGTGATGAAGATTTGAAGAAGGTCTATGAAGGTTTAAAGTTAAGCTATGATAATTTGAGAAATGAAAAAGCCAAAAAGCTCCTATTGATATCTTCTCTATTCCCCGAAGATTTTAATATTCCCATGGAGTTTTTAATTATAATTGGTGTAGGAATGGGCCCTTTTGGTAAGGAAGTTGATGACTACAACAAAAGAAGAAGAAAATCACTTGATGCTGTAGTGGAACTCCTAGGTTCTTCTTTATTGTTGAATGCTGAGAGGGAATGTGTAAAGATGCATGATTTAGTTCATGAAGTAGCCTTATTGATAGGACAAGAAGACATTCAATCCATCATTAAATCTGAACTATCTGTAAAAAAAGGGTTGCAATGTTTATATTGGAAAAATGATGATTTTTTGAGACCTTTTGATAGTCAAAACCTTGAGGTATTATTTCTAGTTCGAGAAGATCAAGAGGCTTTGGAAGTCCCTGATACATTCTTTATAGAGATGACAAAGCTCAAAGTTTTGTTTTTACAAAATAAAGCTTGGCATCGAATTTCAGCTCCATCACTGTTTCCATTAATTCAGTTATTACAAGATATTCGAACTCTCTGGATAAAGAATTTTAATTTACATAGCAACATCTCTATGTTGGGAGGGTTATCAAATCTTGAGACACTTTGGTTGGATGATTGCTCAATCATTAAACCTGGAAAAAAATTTGAGCTACAGAAGTTGAGATTCTTAAGGATAGAAAATTGTGACAGTAATATGAATAATCCTTTTGAATTGATTGAAGCATGCCCAAAGCTAGAGGAGTTGGCTTTTTTGAGTAATGATTATGTCAAGCAGGAAGAAGATACAATTTCTCAAAAACCAGGTAGTTTAACGCATTTAATCTCTGAGGCAACATTTAGGCAACTTGCAAGAACAGCTGAGCTTCTTAGCTTAAGTGGGTATGGAAAACAGAAAAATCTTATCCCTGACATTGTTCCAGTAGATGACACAGGTATGACTGACTTGATCATTCTTCAATTGGATTCTTGGCCTGACATGCAATGTCTCATTGATGCTGTGAACAATCGCTTTGACGTGAAGAATGCCTTTTCCAATTTAGTTGGACTATATCTTTCTAAAATGGGACTAAGCAATATATTATTTAATGGCCACTATAACCTGTGTCATCTGAAGACCTTGAAACTGAAGGAGTGTCCAAAGCTGACGTCAATTTTCCTCCCATCCACTGCTCAAAGCCTTTTGCAGTTAGAAGAGTTGAACATTAAGAGATGTGATGCATTGGAATGCATTGTAGAAGATCAGAGTTCAAGAGGGGAAATAGCTGGTGGTGATGGTGACAATGATCAAAAGAGCTACGGCACTCTGTTTCCAAAGTTTAAAATTCTTAAAATTGATAGTTGTGACAATTTAGAAATAATATTGCCAATCCTTCACGGTGGATGGCATCTGGAAAGAATAATCATACAGCAGTGCAAGAAGTTGAAATATATATTTGATAAGTTCCAAGAGGTCAATGTTATGCTCCCCTCTCTGGAAAGAATGCAACTTGTTAGTCTGTCAAGTCTGGCGACAAGTGAAGAGGCTGATGTTGCTGTTTCTACGGGGAGATTGCTTGACAAAGGAATCTCACAGGGATTACTTGCATCTAAGAAATGGATTGATAATGCTCCTACACTTGGGAGGCAACTAGCACTCCATGTTGTTGGTCATATCAGGAAGATGGAACTTGCATATCTCTCTTCAAATTCGCTGTCAACTTTGTTCACTTTATCCATGGCATCAGCGATATCATGGAAAGAATTGACAATCATCGGTTATGATGGGCTGAAGCACTTGGTAACGAGCGAGGAGGATGATTATAAAGATGAAATCAGTTGCAGTTCCATTTTCCCAAAGTTACAGGAACTTCATATCTCAAAGTGTAATGACTTGGAATTTTTATTTCTGTCTGCAATATCTATAGAAATCAAGAATTTAAAGTCCTTGATCATTGAAGGTGCTCCTCAGCTAACATATGTCATTGAGAAATACCAGCATCACCATCGTTTATCCAATCAAAATCAGAATGACGAGTGGCACTTTGGTCTCCCTGCTTTGGAGGTCCTCTGTTTAGATAGAGTAACTAAGTTCATTAGCATTGGTCCAATGAATTATAAAATGGTGTCACCATCTCTGCAACACATTTGTTCAGACAAAGCACAACTGAATTCGAATACCACAAAGGGATTATTTGCATCAAAGAAATGGATTGATACTGCTCCTACACTTGGGAGGCAACTAGCACTCTATGTTGTTGGTCATATCAGGAAGATGAAACTTGCATATGTCTCTTCAAATTCAGGATCAACTTTGTTCACTTTATCTATGGCATCAGTGATATCATGGGAAGAGATGACAATCAGGGGTTATGATGGGCTAAAGCACTTGGTAACGAGCGAGGAGGATGATTATAAAGATGAAATCAATTGTAGATCCATTTTCCCAAAGTTACAGGAACTTCATATCTCAGAGTGCAAGGACTTGGAATTTTTATTTCTGTCTGCAATATCTATAGAAATTAAGAATTTAAAGTCCTTGATCATTGAAGGTGCTCCTCAGCTGACATATGTCATTGAGAAATACCAACATCAGCATCGTTTATCTTATCAAAATCAGAATGACGAGTGGCACTTTGGTCTCCCTGCTTTGGAGGTCCTCTGTTTAGAGAAAGCACCGAAGTTCATCAGCATCGGTCCAATGAATTATACAATGGTGTCACCATCTCTACAACACGTTTGTTCAGACAAAGCACAACTGAATTCGAATACCACAAAGTTGGATGAAGAGAGTGTAAAAAAAAAAAAAAAGAAGTCAGATGAAGATTGA 3957 0.3763 MESIPVELVKNETQSLVNLVKNEAQYICCFNSYVQEYEQAKGRLKAKLEDVSIKINQARGVSLVTSVALQWTRDAEELINVDTKKEKCFNDLCLNCWPQYQKGRDLAKRTLDIDRLLKICNFDIVVGLTDLPGIKYHCLPNFTHFESRKSIFKELQKALEDEGNNMIGLEGLGGTGKTSMATEVGAELEGSTFGKVIFLVVSKLPDFKHLRGEIAGRLDLKSEDGEYHEKILTKIKALKEKLLIVLDDVWVEFDLRKELGIPPPHLHKGCTILITTRSKEICTKMDCQRIIHLQALTDKEALQLFLEHANSSSTLENLAQKIVKHCHGVPVVIVAVARSLKDRPFKVWTEALRNLQSGESIFNVRDEDLKKVYEGLKLSYDNLRNEKAKKLLLISSLFPEDFNIPMEFLIIIGVGMGPFGKEVDDYNKRRRKSLDAVVELLGSSLLLNAERECVKMHDLVHEVALLIGQEDIQSIIKSELSVKKGLQCLYWKNDDFLRPFDSQNLEVLFLVREDQEALEVPDTFFIEMTKLKVLFLQNKAWHRISAPSLFPLIQLLQDIRTLWIKNFNLHSNISMLGGLSNLETLWLDDCSIIKPGKKFELQKLRFLRIENCDSNMNNPFELIEACPKLEELAFLSNDYVKQEEDTISQKPGSLTHLISEATFRQLARTAELLSLSGYGKQKNLIPDIVPVDDTGMTDLIILQLDSWPDMQCLIDAVNNRFDVKNAFSNLVGLYLSKMGLSNILFNGHYNLCHLKTLKLKECPKLTSIFLPSTAQSLLQLEELNIKRCDALECIVEDQSSRGEIAGGDGDNDQKSYGTLFPKFKILKIDSCDNLEIILPILHGGWHLERIIIQQCKKLKYIFDKFQEVNVMLPSLERMQLVSLSSLATSEEADVAVSTGRLLDKGISQGLLASKKWIDNAPTLGRQLALHVVGHIRKMELAYLSSNSLSTLFTLSMASAISWKELTIIGYDGLKHLVTSEEDDYKDEISCSSIFPKLQELHISKCNDLEFLFLSAISIEIKNLKSLIIEGAPQLTYVIEKYQHHHRLSNQNQNDEWHFGLPALEVLCLDRVTKFISIGPMNYKMVSPSLQHICSDKAQLNSNTTKGLFASKKWIDTAPTLGRQLALYVVGHIRKMKLAYVSSNSGSTLFTLSMASVISWEEMTIRGYDGLKHLVTSEEDDYKDEINCRSIFPKLQELHISECKDLEFLFLSAISIEIKNLKSLIIEGAPQLTYVIEKYQHQHRLSYQNQNDEWHFGLPALEVLCLEKAPKFISIGPMNYTMVSPSLQHVCSDKAQLNSNTTKLDEESVKKKKKKSDED 1318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4280g00001 1318 Gene3D - 134 293 IPR027417 -
Pral4280g00001 1318 Gene3D Ribonuclease Inhibitor 443 655 IPR032675 -
Pral4280g00001 1318 PRINTS Disease resistance protein signature 236 250 - -
Pral4280g00001 1318 PRINTS Disease resistance protein signature 166 181 - -
Pral4280g00001 1318 PRINTS Disease resistance protein signature 749 765 - -
Pral4280g00001 1318 PRINTS Disease resistance protein signature 326 340 - -
Pral4280g00001 1318 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1021 1289 - -
Pral4280g00001 1318 Gene3D Ribonuclease Inhibitor 656 891 IPR032675 -
Pral4280g00001 1318 Pfam NB-ARC domain 153 382 IPR002182 GO:0043531
Pral4280g00001 1318 Gene3D - 295 384 IPR042197 -
Pral4280g00001 1318 Gene3D Ribonuclease Inhibitor 923 1307 IPR032675 -
Pral4280g00001 1318 SUPERFAMILY L domain-like 455 876 - -
Pral4280g00001 1318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 391 IPR027417 -
Pral4280g00001 1318 Coils Coil 34 54 - -
Pral4280g00001 1318 SMART AAA_5 163 296 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4280g00001 Pral-Chr4280 72963 79300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4280g00001 167 480 WRKY Transcription Factor Family AT5G45050 25.758 2.92e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4280g00001 - - pcin:129313598 1000.35