Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4275g00080 ATGCAAACAACTCAGAAACACCCGAGTTCAGTTGGTTTCCATCTGTATCACCAGCCGATGCAAGACACAGGCACATGCCATTTGTCTCATTGCCAGATTTTGCCAAGCAATTTATATAATGAAATCCCTGATGATAGCAGCCAGGGAACCACAGTTTCTTTTGAAAACTACAACCAGCAATACTTTACCCTTGAATCATCCCTACCGCCACCTCCTGGTCCCATAACCTGTGATTCCTCTTCCTTTGCTAGCAATTCATCTAATAGGAGTCCTTTTTCACCACAAGGTTCTCAGACTCAGTCGTCCCTTTCAGATCCGCACCAGTCCCAGGATAACACCTATGGATCACCAATCAGTGGGTGCTCTAGTGTTGATGGTGGTAATGAATTGAAGCACAGACTCAAGGAATTAGAGAATGAATTGTTGGGACCGGAGTCAGATATTGTTGACAGTTGTGATTACTGCCCCGACGGCGGCCACCAGCAAACATCTCCGATGTCTGGATGGAATTGGGACCAGATTGTAGAAATGATTCCTAAGCTTGACTTGAAAGAAGTCCTCATTGCTTGTGCACAAGCTGTGTCCAATGGCGATTTTCAAACCGCAGCAGGATTCATGGATAAAGTATTAGTGAAGATGGTGTCAGTTTCTGGGGATCCACTTCAGAGGTTGGGAGCTTACATGTTGGAGGGGCTTAAAGCGAGGGTGGTATCAACTGGGAGTGCCATCTACAAATCTCTGAAGTGTGAGCAAGAACAACCCCCAACGAGCAAAGAACTGTTAAATTACATGGGCATTCTCTTTAGGATTTGCCCATATTGGCAGTTTGCTTACACATCTGCAAATGCTGTCATCCTAGAAGCAATGCAAAGTGAACCCAGAATTCATATAATTGACTTCCAAATTGCACAGGGCACCCAGTGGAAGTTACTAATTCAGGCTCTTGCACAGCGGCCTGGTGGGCCCCCATGCATTCGGGTAACTGGTGTTGACGACTCCCAATCATTTCATGCTCGAGGTGGAGGGCTTCATATTGTAGGACAGCATTTGGAAAATCATGCCAAGTCTCTTGGAGTGCCGTTTGAGTTCCATAGTGCCGCCATGTCTGGCTGTGAGGTTCAACTTGAGAACCTAGGAGTTCAACCCGGGGAAGCGATTGCTGTGAATTTTCCTTATGTTCTGCATCACATGCCTGATGAGAGTGTTAGCACAGAGAACCACAGAGACAGGCTATTGAGATTGGTCAAGAGCTTGTCACCCAAAGTTATGACCCTTGTTGAGCAGGAATCCAACACCAACACTTCTCCCTTTCACCAAAGGTTTGCTGAGACACTAAATTACTATACAGCCATGTTTGAATCAATTGATGCGGGGAGCTCTAGCAGAGATGATAAGGAGCGGATTAGTGCAGAACAGCACTGTGTGGCTCGAGACATTGTCAACATGATAGCTTGTGAGGGGACAGAGAGGGTAGAGAGGCATGAACTTCTAGGAAAGTGGAGGTCAAGACTTTCCATGGCCGGTTTTAAACAACACCCGTTGAGTGCCTCTACTACGGCTGCAGTCAGAAACTTATTGAAGGGTTTCAAAGAAAAGTACCGTCTTGAATATAGAGATGGTGCTCTCTATCTGTTTTGGATGAACAGAGCTATGTCCACCTCTTCTGCTTGGTGGTGA 1677 0.4615 MQTTQKHPSSVGFHLYHQPMQDTGTCHLSHCQILPSNLYNEIPDDSSQGTTVSFENYNQQYFTLESSLPPPPGPITCDSSSFASNSSNRSPFSPQGSQTQSSLSDPHQSQDNTYGSPISGCSSVDGGNELKHRLKELENELLGPESDIVDSCDYCPDGGHQQTSPMSGWNWDQIVEMIPKLDLKEVLIACAQAVSNGDFQTAAGFMDKVLVKMVSVSGDPLQRLGAYMLEGLKARVVSTGSAIYKSLKCEQEQPPTSKELLNYMGILFRICPYWQFAYTSANAVILEAMQSEPRIHIIDFQIAQGTQWKLLIQALAQRPGGPPCIRVTGVDDSQSFHARGGGLHIVGQHLENHAKSLGVPFEFHSAAMSGCEVQLENLGVQPGEAIAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVMTLVEQESNTNTSPFHQRFAETLNYYTAMFESIDAGSSSRDDKERISAEQHCVARDIVNMIACEGTERVERHELLGKWRSRLSMAGFKQHPLSASTTAAVRNLLKGFKEKYRLEYRDGALYLFWMNRAMSTSSAWW 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4275g00080 558 MobiDBLite consensus disorder prediction 77 122 - -
Pral4275g00080 558 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 121 546 IPR005202 -
Pral4275g00080 558 MobiDBLite consensus disorder prediction 63 122 - -
Pral4275g00080 558 ProSiteProfiles GRAS family profile. 174 558 IPR005202 -
Pral4275g00080 558 Pfam GRAS domain family 183 557 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4275g00080 Pral-Chr4275 475448 478781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4275g00080 1 557 GRAS Transcription Factor Family AT4G17230 56.429 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral4275g00080 GRAS 1.2e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4275g00080 - - gmx:100819190 773.467