Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4275g00065 ATGGGGCGTTCTCGTGGGAATTTCCACGCTGATGAGGACCCCAATCAAAGGTCAAGGAGAAAAAAGAATGCTGCTAGTGGAGATATTACAGAACCTGGAGCTGCAGGTCAAGGAACAAGTGAAGGAAAAAAGGCTTTGTACCATTGCAATTACTGTAACAAAGATATTACAGGAAAAATACGTATTAAGTGTGCCATGTGTCCTGATTTTGACCTATGTATAGAGTGCTTTTCTGTGGGAGCTGAGGTGACCCCTCATAAAAGCAATCACCCTTACAGGGTTATGGATAATTTATCTTTCCCTCTCATTTGCCCAGATTGGAATGCAGATGATGAAATTCTGCTTCTGGAGGGAATTGAAATGTACGGCTTGGGGAACTGGGCAGAAGTTGCTGAGCATGTTGGGACAAAGAATAAAGAAGCATGCATAGAACACTATAGGAATGTTTACTTGAACTCCAAAACCTTTCCTCTCCCCGACATGTCCCATGTTGTTGGGAAAAACAGAAAGGAGCTGCTTGCTATGGCTAAAGGGCAAAGCGATGACAAAAAAGGGATTCCAATGGGGGATCTTGGCATAAAGGAAGAATCTCCATTTTCTCCAGCTAGAGTCAAAGTGGAAGATTCTCATAAAGCTGGTAAATCTAGCCGTTTACAGTCCAACTTAAATTCAGAATCTGGACACTCTAGTGGTTCGCATACTGCAGCAACTGCTAACCAGAGGGCATCTAATGTGGGACGGGGCAAAGATGGTCCTGGAGTTATCAAAATGGAAGATGCCCAACTAGAAAAATATTCTGGAGGAAACAAGCCAAGTTCCTCTGGAAATGAAGGTCCTTCTTTAGTAGAGTTGAGTGGTTATAACCCCAAAAGACAGGAATTCGATCCTGAATATGACAATGATGCTGAACAGTTACTTGCTGAAATGGAATTTAAGGACACTGACACAGATGACGAACGGGAACTGAAACTACGCATTCTGCGTATATATTCAAAAAGGCTCGATGAAAGAAAACATAGAAAGGATTTCATACTTGAAAGAAATTTGCTATACCCAAATCCTTTTGAGAAGGATTTAACACCTGAGGAGAGGACTATATGTCGAAAATATGATGTATTCATGCGCTTTCATACCAAGGAAGATCATGAGGAATTGCTTAAAGTAGTAATATCTGAGCACAGAATTCGTAGGAGAATTGAAGAGCTTCAGGAGGCCCGAGCTGCTGGTTGCCGCACATCGACTGAAGCAGATAGATATCTTGAACAGAAGAGAAGGAGAGAGGCAGAAGAAAGTGCTCGTAGGTCAAAAGAAAGAGCTCAAACTGGTCCAAACAATCATGGGGTTCCAAGTGCATTCATGTCTCCAGACTCCGCTGGCAAAGATTCAAGTGCAAGACCAGCAGGGCCTGCTGGTTCGAGCTCTGTCAATGAAATGGATGTGACAGGATATTATGGGGCTGATCTTCTTTCTGCACCTGAAAAACGTCTATGCTGTGAGCATAGGTTGCCTCCAGCCATCTTCCTGAAGATGCAAGAGGTTCTATCTGTACAAATACTGAGTGGCAATATCACTGCAAAATCTGATGCCCACCACTTATTCAATATGGATAGCAGCAAGATTGATTGCGTGTACGATATACTTATGAAGAAGGGGATTGCCATGCCCTGA 1668 0.4293 MGRSRGNFHADEDPNQRSRRKKNAASGDITEPGAAGQGTSEGKKALYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWAEVAEHVGTKNKEACIEHYRNVYLNSKTFPLPDMSHVVGKNRKELLAMAKGQSDDKKGIPMGDLGIKEESPFSPARVKVEDSHKAGKSSRLQSNLNSESGHSSGSHTAATANQRASNVGRGKDGPGVIKMEDAQLEKYSGGNKPSSSGNEGPSLVELSGYNPKRQEFDPEYDNDAEQLLAEMEFKDTDTDDERELKLRILRIYSKRLDERKHRKDFILERNLLYPNPFEKDLTPEERTICRKYDVFMRFHTKEDHEELLKVVISEHRIRRRIEELQEARAAGCRTSTEADRYLEQKRRREAEESARRSKERAQTGPNNHGVPSAFMSPDSAGKDSSARPAGPAGSSSVNEMDVTGYYGADLLSAPEKRLCCEHRLPPAIFLKMQEVLSVQILSGNITAKSDAHHLFNMDSSKIDCVYDILMKKGIAMP 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4275g00065 555 Gene3D - 101 152 - -
Pral4275g00065 555 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 47 550 - -
Pral4275g00065 555 MobiDBLite consensus disorder prediction 416 440 - -
Pral4275g00065 555 Pfam Myb-like DNA-binding domain 106 149 IPR001005 -
Pral4275g00065 555 PIRSF Txn_adaptor_ADA2 34 554 IPR016827 GO:0003713|GO:0006357|GO:0035065
Pral4275g00065 555 FunFam Transcriptional adapter 40 95 - -
Pral4275g00065 555 ProSiteProfiles SANT domain profile. 102 154 IPR017884 -
Pral4275g00065 555 Pfam Zinc finger, ZZ type 45 87 IPR000433 GO:0008270
Pral4275g00065 555 FunFam Transcriptional adapter 2 100 152 - -
Pral4275g00065 555 Gene3D - 470 553 IPR036388 -
Pral4275g00065 555 MobiDBLite consensus disorder prediction 200 214 - -
Pral4275g00065 555 MobiDBLite consensus disorder prediction 266 281 - -
Pral4275g00065 555 MobiDBLite consensus disorder prediction 404 476 - -
Pral4275g00065 555 ProSiteProfiles Zinc finger ZZ-type profile. 44 100 IPR000433 GO:0008270
Pral4275g00065 555 ProSiteProfiles SWIRM domain profile. 469 555 IPR007526 GO:0005515
Pral4275g00065 555 FunFam Transcriptional adapter 2 470 554 - -
Pral4275g00065 555 MobiDBLite consensus disorder prediction 215 244 - -
Pral4275g00065 555 Gene3D - 38 95 IPR043145 -
Pral4275g00065 555 MobiDBLite consensus disorder prediction 175 293 - -
Pral4275g00065 555 ProSitePatterns Zinc finger ZZ-type signature. 49 76 IPR000433 GO:0008270
Pral4275g00065 555 ProSiteProfiles Myb-like domain profile. 107 150 IPR001005 -
Pral4275g00065 555 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 154 IPR017930 -
Pral4275g00065 555 MobiDBLite consensus disorder prediction 1 41 - -
Pral4275g00065 555 MobiDBLite consensus disorder prediction 175 190 - -
Pral4275g00065 555 SUPERFAMILY Homeodomain-like 100 153 IPR009057 -
Pral4275g00065 555 MobiDBLite consensus disorder prediction 1 26 - -
Pral4275g00065 555 SUPERFAMILY RING/U-box 47 109 - -
Pral4275g00065 555 SUPERFAMILY Homeodomain-like 462 552 IPR009057 -
Pral4275g00065 555 CDD SANT 107 149 IPR001005 -
Pral4275g00065 555 SMART zz_5 43 88 IPR000433 GO:0008270
Pral4275g00065 555 SMART sant 103 152 IPR001005 -
Pral4275g00065 555 CDD ZZ_ADA2 47 95 IPR041983 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4275g00065 Pral-Chr4275 373596 379177 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4275g00065 1 552 EF-hand Containing Proteins AT3G07740 47.751 9.47e-162 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4275g00065 Myb_DNA-binding 2.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4275g00065 K11314 - gmx:100811887 922.154