Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4275g00024 ATGGAGGCTCTTTCGTGGACCCTCAAGCACCTGATAACTTCTCCTTCCACCATGGTCTATCTCATCCACGTCTTCCCTGAGATCAAACACATTCCTAATCCATTGGGAATGGGTATGGTTCCAAAGAACCAAGTGAGTGCAGAGCAGATTGAGAGCTATGAGGCTCAACAACGTGCCAAGCGACGACTCCTGCTTTCCAAGTTCCTCCAATTATGCTCTTCTTCGCAGGTCAAGGTGGACACCATTTTAATTGAGAGTGACACGGTGGCCAAGGCAATCCTGGAGCTCGTCCCCATTCTTCACATACAAAAGCTTGTCATTGGAACCAACAAATCCAATCTAAGAAAATCGAGATCAAAGAGAGGGAATAATGGGATAGCAGATCAGATTCTGCAGAATGCACCAGAAAGTTGCAGGGTCAGAATTATAAGTGAAGGCAAAGAAGTCAACCAACAAATGTTGACCATGATGTCTCCTTCTCCTCATGCTCCTTCCCCTCGTGCAGCCATGGCCGAGAGTAATAATAGTAATGATAATCACATTCAGACGTCCATGCACATGAAAGAAGAGGATCGTCACAATGGTCCAGTTTCTTGCATTTGTTTTAAACCCATGTTTAAATGA 624 0.4487 MEALSWTLKHLITSPSTMVYLIHVFPEIKHIPNPLGMGMVPKNQVSAEQIESYEAQQRAKRRLLLSKFLQLCSSSQVKVDTILIESDTVAKAILELVPILHIQKLVIGTNKSNLRKSRSKRGNNGIADQILQNAPESCRVRIISEGKEVNQQMLTMMSPSPHAPSPRAAMAESNNSNDNHIQTSMHMKEEDRHNGPVSCICFKPMFK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4275g00024 207 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 3 115 - -
Pral4275g00024 207 Gene3D HUPs 1 153 IPR014729 -
Pral4275g00024 207 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4275g00024 Pral-Chr4275 128164 131246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4275g00024 3 173 Plant U-box Gene Family AT5G57035 26.437 1.82e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4275g00024 - - pcin:129286716 337.035