Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4273g00045 ATGGCCGATGAATCCAATACTACTTGCTGGTCTTTCCTGGACTTCCGCCAGTCTTATGGTGCGAAGAAAATGTTGGAGAACGGCGAGACGGTAGATATGCCGGTCGATAACGGGAATTCTTCGGGTGCTATGTCTAATGGCGACAATCATGCCAAAAGGACTACGGAGACGACTATCTTTGAACAGTTTCAAAGCCAGAACTCAACTCATTCGAATGGATTTTCATCAAATCATCTGGATGAAAGGCCGCAAAAGCCCTTACTTCCCCCTTTTGAATCAGCTGATATGCGTGCTTTAGGAGAGAGTTTATGTAGGGATATTATTCGTGGGAGCCCAGATGTTAAATGGGAAAGCATCAAGGGGTTAGAAAATGCCAAACGTCTACTGAAAGAGGCAGTTGTGATGCCAATTAAGTATCCCAAGTACTTCACTGGTTTATTATCACCGTGGAAAGGGATTCTTTTGTTTGGCCCTCCTGGAACTGGAAAGACAATGCTTGCAAAGGCAGTTGCAACAGAGTGCAAGACTACATTTTTTAATATTTCAGCATCATCTGTTGTCAGCAAGTGGCGAGGTGATTCAGAGAAGCTGGTGAGGGTGTTATTTGAGTTAGCTCGGCATCATGCACCCTCAACAATATTTCTTGATGAAATCGATGCAATCATTAGTCAGCGTGGTGAGGCACGCAGTGAGCATGAAGCAAGTAGACGGCTTAAGACTGAGCTACTCATACAGATGGACGGTTTGACAAAAACCAATGAGCTTGTTTTTGTTTTGGCGGCAACAAATCTTCCCTGGGAATTGGATGCAGCAATGCTCCGACGTCTTGAGAAGCGAATCCTTGTACCACTTCCAGAACCAGAAGCAAGAAGAGCAATGGTTGAGGAACTTCTTCCACCATATGATAGTGAGGAGCAGGTCCCCTATGATTTCTTGGTGGAGCAAACAGAAGGATATTCAGGCTCAGATATTCGTTTACTGTGTAAAGAGGCAGCAATGCAGCCCTTGAGACGCTTGATGTCACAACTTGAACAGAGACAAGAGCTGGTGCCTGAAGAAGAGTTGCCAAAAGTGGGGCCAGTCAAACCAGAAGACATAAAGGTAGCTTTGAAGAACACACGGCCATCTGCTCATCTGCTTGCTTCCAGATATGAAAAGTTCAATGATGATTACGGTAGTCAAATTCTGCATTGA 1194 0.4481 MADESNTTCWSFLDFRQSYGAKKMLENGETVDMPVDNGNSSGAMSNGDNHAKRTTETTIFEQFQSQNSTHSNGFSSNHLDERPQKPLLPPFESADMRALGESLCRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVRVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTKTNELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMVEELLPPYDSEEQVPYDFLVEQTEGYSGSDIRLLCKEAAMQPLRRLMSQLEQRQELVPEEELPKVGPVKPEDIKVALKNTRPSAHLLASRYEKFNDDYGSQILH 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4273g00045 397 SMART AAA_5 149 286 IPR003593 GO:0016887
Pral4273g00045 397 FunFam Katanin p60 ATPase-containing subunit A-like 2 112 296 - -
Pral4273g00045 397 MobiDBLite consensus disorder prediction 64 79 - -
Pral4273g00045 397 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 376 IPR027417 -
Pral4273g00045 397 Gene3D - 285 373 - -
Pral4273g00045 397 Pfam AAA+ lid domain 312 346 IPR041569 -
Pral4273g00045 397 Gene3D - 112 387 IPR027417 -
Pral4273g00045 397 Pfam ATPase family associated with various cellular activities (AAA) 153 283 IPR003959 GO:0005524|GO:0016887
Pral4273g00045 397 MobiDBLite consensus disorder prediction 64 91 - -
Pral4273g00045 397 PANTHER AAA DOMAIN-CONTAINING 55 393 - -
Pral4273g00045 397 FunFam Katanin p60 ATPase-containing subunit A-like 2 285 373 - -
Pral4273g00045 397 CDD RecA-like_VPS4-like 119 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4273g00045 Pral-Chr4273 335439 343196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4273g00045 147 356 Calmodulin-binding Proteins AT3G56690 36.150 1.60e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4273g00045 K07767 - qsa:O6P43_012974 635.565