Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4273g00018 ATGGCGAAGGAAGCTACGCGGTCGAGAAAGAGGTCTCTCTCATTACCGTCTGCTTCTGCTTCTAATGAAAGCTCTCCCAGAACTTCTTCTGACGGGATAGTGTTGCGGGTAAAGTTAAATGAGGGGATGAAGAGATCTTCCCAGCTGACTAAATCGGGGAAGAAACCCAAAGCAAAGCAGAAGAAGGTTAACAAAAAAATTGATGCTAAGAAACCAAAGAAACCCCCAACTGCTTTCTTCTACTTCTTGGAGGATTTTCGTAAAGAATTTCAAGAGCAGAATCCAGATGTCAAGTCAATGCGTGATATCGGCAAGGCTTGTGGAGAGAAGTGGAAAACAATGACTTATGAGGAGAAGGTTCAATACTACGATATAGCCACAGAAAAACGCGCAGAATTTGATAGAGCAATGATAGAATATAAGAAGAAAATGGAAAGTGGAGAGTACGAAGAAACCGATGAAGAATCAGACTTTGATGATGTGTAG 486 0.4177 MAKEATRSRKRSLSLPSASASNESSPRTSSDGIVLRVKLNEGMKRSSQLTKSGKKPKAKQKKVNKKIDAKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMIEYKKKMESGEYEETDEESDFDDV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4273g00018 161 MobiDBLite consensus disorder prediction 11 31 - -
Pral4273g00018 161 Gene3D High mobility group box domain 52 157 IPR036910 -
Pral4273g00018 161 SMART hmgende2 71 142 IPR009071 -
Pral4273g00018 161 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 46 157 IPR031061 -
Pral4273g00018 161 Pfam HMG (high mobility group) box 72 141 IPR009071 -
Pral4273g00018 161 CDD HMG-box_AtHMGB1-like 77 133 - -
Pral4273g00018 161 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 72 141 IPR009071 -
Pral4273g00018 161 MobiDBLite consensus disorder prediction 1 73 - -
Pral4273g00018 161 MobiDBLite consensus disorder prediction 50 69 - -
Pral4273g00018 161 SUPERFAMILY HMG-box 65 146 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4273g00018 Pral-Chr4273 133604 138370 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Pral4273g00018 HMG_box 4.5e-18 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4273g00018 - - vum:124844238 165.622