Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4273g00009 ATGCTCCAAAAAGTTTTATTGATCATATTGGGAGTATTAATTTCCAAAGCTATCAGACTCATCTCTCATTGGCGCAATGGTAACCAACCTGCTGCTATTGATGCTAGTTCTGAGGATGATGTTATTTTGACTCAAATGAATTCTCCTCCTGCTACCAAGTATGATGTGTTCCTTAGCTTTAGAGGAGAAGACACTCGCCACAATTTTGCAAGTTATCTTTGTAAAGGACTTCAAAATGCAGGCATTCACACTTTTATGGATCACGAACTCCGCAAAGGAGAATCAATCTCACCTGTTCTTCAAAGAACAATAGAGGAATCAGAAATATCTATGATTATTTTCTCCCAAAATTATGCTTCTTCAACTTGGTGTCTGGATGAGCTTGTTCACATATTAGAATGCAAGCGTAAATTTGGAAGGGTTGTGATACCTATTTTCTATAACATAGATCCTTCAAACATACGCAAACAAAATGGGAATTTTGGAAAAGGATTTCATGTATTGAAGCAAAGATTTAAAGGCAACCAACAAAAATTGCAAAAGTGGAGAAATGCTTTAATCCAATCCACAAGTTTCTCTGGATGGGATTCCCACAGTACCAGACCTGAATTCAAACTTATTGAAGAGATTGTCAAAGATATTTCGAGAAAGTTGGACTATGCGTCATCATCTCATCTTGAAGGACTCATTGGCATTGCTCGACATGTTAAAAACATTCGAAGGCTTCTAACTGGGGCTCGCATTGTAGGAATATGGGGTATGGGTGGTGCTGGTAAGACCACACTTGCTAAAGCCATATTTCAAGAGTTGAGAGCTCAATTTGACACTTTCTCCTTTATTGAAAATGTCAAAGAGCAATTAAAAAGAATTAGTTTGGATGAGCTACAGAAGAATTGCCTCAAAGAATTATTAAAAGATGAGGGCATTAGCATCTATGACATAAAATCCACTTTTGTGAAAAATAGGCTTCAGAGCAAAAAAATTCTTCTTATACTTGATGATGTGGACAAGTCAATAGTAGCGGCAGATTTAACCAAGGTACTTGATTGGTTTGGTGAAGGAAGTAGAATTATTATCACATCAAGGGACATGCAAGTGCTGAAGAATGCTTCTGCTGCATTTTCAACATATCATGTTCCAGACTTGGGTTTTGATAATGCTTTTCATCTCTTTAGTTTGAAAGCATTCAAGCAAGATGAGCCATCTAAAGGTTACATGGAGTTATCAAAATCAGTAGTGAAATATTGTCACGGAAACCCATTAGCCCTAGTAGTGCTAGGTTGCTTCCTCTATGGCAGAGGAAAAGAAGAGTGGGAAAGTGCTTTGGAAAAACTAAATCAAGCTCCACCAAAGGATATTGTTGATGTTTTGAAGTTGAGTTTCGATGGACTTGATGACAAACAGCAGGAAGTGTTTCTTGACCTAGCATTCTTAATCAAGCAAGGAGTTGATATTTCTTTGAACCTAACGAGACAATTATATAGCTCTTCTATGCATATTGAGATTAGTACTCTTAGAGAGAAGTCCCTCATTTCATTTGATAATAATCATAATGATCTTATTGAGATGCACGATCTTGTGAGGAAAATGGGCCTTGAAATTTCAAGCCAACAATTATTCTCTGGTTCCAAAATCCCTGTTCGACTATGGAAGCATAAGGATATTTATCGGTTTTTCAACAATGACCAGCAGGCAATTGAGGCAATTCGATGCATGTCATTGGATGCAACCAAGATAGAAAGCATGACATTGAGGGCTAGTCATTTTAGAACGATGCATTATTTAATGTCTCTTCAAGTTTACAAGTCACATTGGGAAAATCCTTCAAAGTTGAGTATTTGTGAACCGTTGGATTATCTTTCTAAAGAATTAAGGTTTCTTAGTTGGGAAGAATATCCACTACCATCTGTGCCATTACAATTTTGTGCTGAGAATCTCATTGAACTTAATTTGCCTGACAGTAATATCCAACAGCTTTGGGAGCAGCAATTTCCAAATCTGAAGGAAATAAATCTAACAGGTTCAAAGAATCTCATGGCTCTCCCAGATATGTCTCAAGCCCCTAAAGTTAAATCTTTGCATTAA 2085 0.3698 MLQKVLLIILGVLISKAIRLISHWRNGNQPAAIDASSEDDVILTQMNSPPATKYDVFLSFRGEDTRHNFASYLCKGLQNAGIHTFMDHELRKGESISPVLQRTIEESEISMIIFSQNYASSTWCLDELVHILECKRKFGRVVIPIFYNIDPSNIRKQNGNFGKGFHVLKQRFKGNQQKLQKWRNALIQSTSFSGWDSHSTRPEFKLIEEIVKDISRKLDYASSSHLEGLIGIARHVKNIRRLLTGARIVGIWGMGGAGKTTLAKAIFQELRAQFDTFSFIENVKEQLKRISLDELQKNCLKELLKDEGISIYDIKSTFVKNRLQSKKILLILDDVDKSIVAADLTKVLDWFGEGSRIIITSRDMQVLKNASAAFSTYHVPDLGFDNAFHLFSLKAFKQDEPSKGYMELSKSVVKYCHGNPLALVVLGCFLYGRGKEEWESALEKLNQAPPKDIVDVLKLSFDGLDDKQQEVFLDLAFLIKQGVDISLNLTRQLYSSSMHIEISTLREKSLISFDNNHNDLIEMHDLVRKMGLEISSQQLFSGSKIPVRLWKHKDIYRFFNNDQQAIEAIRCMSLDATKIESMTLRASHFRTMHYLMSLQVYKSHWENPSKLSICEPLDYLSKELRFLSWEEYPLPSVPLQFCAENLIELNLPDSNIQQLWEQQFPNLKEINLTGSKNLMALPDMSQAPKVKSLH 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4273g00009 694 SMART till_3 53 192 IPR000157 GO:0007165
Pral4273g00009 694 Gene3D Ribonuclease Inhibitor 498 694 IPR032675 -
Pral4273g00009 694 Gene3D - 51 220 IPR035897 -
Pral4273g00009 694 SUPERFAMILY L domain-like 573 693 - -
Pral4273g00009 694 Pfam TIR domain 53 225 IPR000157 GO:0007165
Pral4273g00009 694 SMART AAA_5 245 385 IPR003593 GO:0016887
Pral4273g00009 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 475 IPR027417 -
Pral4273g00009 694 SUPERFAMILY "Winged helix" DNA-binding domain 452 558 IPR036390 -
Pral4273g00009 694 Pfam NB-ARC domain 246 449 IPR002182 GO:0043531
Pral4273g00009 694 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 54 693 IPR044974 GO:0006952
Pral4273g00009 694 FunFam Disease resistance protein (TIR-NBS-LRR class) 50 220 - -
Pral4273g00009 694 Pfam Leucine Rich Repeat 645 661 IPR011713 -
Pral4273g00009 694 ProSiteProfiles TIR domain profile. 52 218 IPR000157 GO:0007165
Pral4273g00009 694 Gene3D - 382 465 IPR042197 -
Pral4273g00009 694 Gene3D - 221 376 IPR027417 -
Pral4273g00009 694 PRINTS Disease resistance protein signature 322 336 - -
Pral4273g00009 694 PRINTS Disease resistance protein signature 662 678 - -
Pral4273g00009 694 PRINTS Disease resistance protein signature 248 263 - -
Pral4273g00009 694 PRINTS Disease resistance protein signature 416 430 - -
Pral4273g00009 694 SUPERFAMILY Toll/Interleukin receptor TIR domain 49 195 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4273g00009 Pral-Chr4273 70004 76109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4273g00009 54 687 WRKY Transcription Factor Family AT4G12020 29.800 1.33e-65 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4273g00009 - - pcin:129286024 838.18