Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4273g00007 ATGCTCCAAAAAGTTTTATTGATCATATTGGGAGTATTAATTTCCAAAGCTATCAGACTCATCTCTCATTGGCGCAATGGTAACCAACCTGCTGCTATTGATGCTAGTTCTGAGGATGATGTTATTTTGACTCAAATGAATTCTCCTCCTGCTACCAAGTATGATGTGTTCCTTAGCTTTAGAGGAGAAGACACTCGCCACAATTTTGCAAGTTATCTTTGTAAAGGACTTCAAAATGCAGGCATTCACACTTTTATGGATCACGAACTCCGCAAAGGAGAATCAATCTCACCTGTTCTTCAAAGAACAATAGAGGAATCAGAAATATCTATGATTATTTTCTCCCAAAATTATGCTTCTTCAACTTGGTGTCTGGATGAGCTTGTTCACATATTAGAATGCAAGCGTAAATTTGGAAGGGTTGTGATACCTATTTTCTATAACATAGATCCTTCAAACATACGCAAACAAAATGGGAATTTTGGAAAAGGATTTCATGTATTGAAGCAAAGATTTAAAGGCAACCAACAAAAATTGCAAAAGTGGAGAAATGCTTTAATCCAATCCACAAGTTTCTCTGGATGGGATTCCCACAGTACCAGACCTGAATTCAAACTTATTGAAGAGATTGTCAAAGATATTTCGAGAAAGTTGGACTATGCGTCATCATCTCATCTTGAAGGACTCATTGGCATTGCTCGACATGTTAAAAACATTCGAAGGCTTCTAACTGGGGCTCGCATTGTAGGAATATGGGGTATGGGTGGTGCTGGTAAGACCACACTTGCTAAAGCCATATTTCAAGAGTTGAGAGCTCAATTTGACACTTTCTCCTTTATTGAAAATGTCAAAGAGCAATTAAAAAGAATTAGTTTGGATGAGCTACAGAAGAATTGCCTCAAAGAATTATTAAAAGATGAGGGCATTAGCATCTATGACATAAAATCCACTTTTGTGAAAAATAGGCTTCAGAGCAAAAAAATTCTTCTTATACTTGATGATGTGGACAAGTCAATAGTAGCGGCAGATTTAACCAAGGTACTTGATTGGTTTGGTGAAGGAAGTAGAATTATTATCACATCAAGGGACATGCAAGTGCTGAAGAATGCTTCTGCTGCATTTTCAACATATCATGTTCCAGACTTGGGTTTTGATAATGCTTTTCATCTCTTTAGTTTGAAAGCATTCAAGCAAGATGAGCCATCTAAAGGTTACATGGAGTTATCAAAATCAGTAGTGAAATATTGTCACGGAAACCCATTAGCCCTAGTAGTGCTAGGTTGCTTCCTCTATGGCAGAGGAAAAGAAGAGTGGGAAAGTGCTTTGGAAAAACTAAATCAAGCTCCACCAAAGGATATTGTTGATGTTTTGAAGTTGAGTTTCGATGGACTTGATGACAAACAGCAGGAAGTGTTTCTTGACCTAGCATTCTTAATCAAGCAAGGAGTTGATATTTCTTTGAACCTAACGAGACAATTATATAGCTCTTCTATGCATATTGAGATTAGTACTCTTAGAGAGAAGTCCCTCATTTCATTTGATAATAATCATAATGATCTTATTGAGATGCACGATCTTGTGAGGAAAATGGGCCTTGAAATTTCAAGCCAACAATTATTCTCTGGTTCCAAAATCCCTGTTCGACTATGGAAGCATAAGGATATTTATCGGTTTTTCAACAATGACCAGGCAATTGAGGCAATTCGATGCATGTCATTGGATGCAACCAAGATAGAAAGCATGACATTGAGGGCTAGTCATTTTAGAACGATGCATTATTTAATGTCTCTTCAAGTTTACAAGTCACATTGGGAAAATCCTTCAAAGTTGAGTATTTGTGAACCGTTGGATTATCTTTCTAAAGAATTAAGGTTTCTTAGTTGGGAAGAATATCCACTACCATCTGTGCCATTACAATTTTGTGCTGAGAATCTCATTGAACTTAATTTGCCTGACAGTAATATCCAACAGCTTTGGGAGCAGCAATTTCCAAATCTGAAGGAAATAAATCTAACAGGTTCAAAGAATCTCATGGCTCTCCCAGATATGTCTCAAGCCCCTAAAGTTAAATCTTTGCATTAA 2082 0.3694 MLQKVLLIILGVLISKAIRLISHWRNGNQPAAIDASSEDDVILTQMNSPPATKYDVFLSFRGEDTRHNFASYLCKGLQNAGIHTFMDHELRKGESISPVLQRTIEESEISMIIFSQNYASSTWCLDELVHILECKRKFGRVVIPIFYNIDPSNIRKQNGNFGKGFHVLKQRFKGNQQKLQKWRNALIQSTSFSGWDSHSTRPEFKLIEEIVKDISRKLDYASSSHLEGLIGIARHVKNIRRLLTGARIVGIWGMGGAGKTTLAKAIFQELRAQFDTFSFIENVKEQLKRISLDELQKNCLKELLKDEGISIYDIKSTFVKNRLQSKKILLILDDVDKSIVAADLTKVLDWFGEGSRIIITSRDMQVLKNASAAFSTYHVPDLGFDNAFHLFSLKAFKQDEPSKGYMELSKSVVKYCHGNPLALVVLGCFLYGRGKEEWESALEKLNQAPPKDIVDVLKLSFDGLDDKQQEVFLDLAFLIKQGVDISLNLTRQLYSSSMHIEISTLREKSLISFDNNHNDLIEMHDLVRKMGLEISSQQLFSGSKIPVRLWKHKDIYRFFNNDQAIEAIRCMSLDATKIESMTLRASHFRTMHYLMSLQVYKSHWENPSKLSICEPLDYLSKELRFLSWEEYPLPSVPLQFCAENLIELNLPDSNIQQLWEQQFPNLKEINLTGSKNLMALPDMSQAPKVKSLH 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4273g00007 693 SMART till_3 53 192 IPR000157 GO:0007165
Pral4273g00007 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 475 IPR027417 -
Pral4273g00007 693 PRINTS Disease resistance protein signature 661 677 - -
Pral4273g00007 693 PRINTS Disease resistance protein signature 248 263 - -
Pral4273g00007 693 PRINTS Disease resistance protein signature 416 430 - -
Pral4273g00007 693 PRINTS Disease resistance protein signature 322 336 - -
Pral4273g00007 693 Gene3D Ribonuclease Inhibitor 560 693 IPR032675 -
Pral4273g00007 693 Pfam TIR domain 53 225 IPR000157 GO:0007165
Pral4273g00007 693 SUPERFAMILY L domain-like 571 692 - -
Pral4273g00007 693 Gene3D - 51 220 IPR035897 -
Pral4273g00007 693 SMART AAA_5 245 385 IPR003593 GO:0016887
Pral4273g00007 693 Gene3D - 221 376 IPR027417 -
Pral4273g00007 693 SUPERFAMILY "Winged helix" DNA-binding domain 452 558 IPR036390 -
Pral4273g00007 693 Pfam NB-ARC domain 246 449 IPR002182 GO:0043531
Pral4273g00007 693 Pfam Leucine Rich Repeat 644 660 IPR011713 -
Pral4273g00007 693 FunFam Disease resistance protein (TIR-NBS-LRR class) 50 220 - -
Pral4273g00007 693 ProSiteProfiles TIR domain profile. 52 218 IPR000157 GO:0007165
Pral4273g00007 693 Gene3D - 382 465 IPR042197 -
Pral4273g00007 693 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 54 692 IPR044974 GO:0006952
Pral4273g00007 693 SUPERFAMILY Toll/Interleukin receptor TIR domain 49 195 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4273g00007 Pral-Chr4273 70004 76109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4273g00007 54 686 WRKY Transcription Factor Family AT4G12020 29.846 4.15e-67 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4273g00007 - - pcin:129286024 842.802