Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4273g00006 ATGGGTGGTGCTGGTAAGACCATGCTTGCTAAAGCTATATTTCAAGAGTTGAAAGCTCAATTTGACACTTTCTCCTTTATTGAAAGTGTTAAAGAGCTTCAACGCAAAAAGATTCTTCTTATACTTGATGATGTGGAAAATTTGATAATAGCCGAAGATTTAAGTAGAGTGTGTGATTGGTTTGGGGAAGGAAGTAGAATTATTATCACATCAAGAGACATGCAAGTACTTAAGCATGCTTCTGCATTTTCAACATATCATGTTCTGGATTTGGATTTTGATGATGCCTTTCATCTCTTTAGTTTGAAAGCATTCAAGCAATATGAGCCATTTAAAGGTTACATGGGGTTATCAAAATCAGTAGTGAAATATTGTCAAGGAAACCCATTAGCCCTAATAGTGCTGGGTTGCTTTCTCTATGGCAGAGGGAAAGAAGAGTGGGAAAGTGCTTTGGACAAACTAAATCAAACTCCCCACAAGAACATCGTTGATGTTTTGAAGTTGAGTTTTGATGGACTTGATAACAAACAACAAAATCTTTTTCTTTACTTGGCATTCTTAATCAATGCAAGAGTTTATAAGTCTTTTGATCTAATAAGACAATTATACGGCTCTTCTGTGCATATTGAGATGAGTGTTCTTAGAGAGAGATCGCTCATTTCGGTTTCTCAAAAGGAAAAGATTGGGATGCACGATCTTGTGTTGCAAATGGGCTTTGAAATTGCTAGACAGCAGTTATTCTCTAGTCCTAAGACCCCTGTTCGACTATGGAGGCATGATGAGATTGAGGCAATTCGATGCATGTCATTGGACGCGAGCAAGATAAAAAGGATTGCATTGAGAGCTAGTAATTTCCAAAAGATGTATAATTTAATATTTCTGAAAGTTTACAAGTCTGATCGGGAAAAGCCTTCAAGGTTGAATATTTGTGGAGATTTGGATTATCTTTCAGAAGAGATAAGGTTTTTCAGTTGGGAAGAATATCCACTACCATATGTCCCACTACAATTTTGTGCCGAGAATCTTATTACACTTGAAATGCCTTAA 1047 0.3658 MGGAGKTMLAKAIFQELKAQFDTFSFIESVKELQRKKILLILDDVENLIIAEDLSRVCDWFGEGSRIIITSRDMQVLKHASAFSTYHVLDLDFDDAFHLFSLKAFKQYEPFKGYMGLSKSVVKYCQGNPLALIVLGCFLYGRGKEEWESALDKLNQTPHKNIVDVLKLSFDGLDNKQQNLFLYLAFLINARVYKSFDLIRQLYGSSVHIEMSVLRERSLISVSQKEKIGMHDLVLQMGFEIARQQLFSSPKTPVRLWRHDEIEAIRCMSLDASKIKRIALRASNFQKMYNLIFLKVYKSDREKPSRLNICGDLDYLSEEIRFFSWEEYPLPYVPLQFCAENLITLEMP 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4273g00006 348 Pfam NB-ARC domain 31 160 IPR002182 GO:0043531
Pral4273g00006 348 Gene3D - 90 174 IPR042197 -
Pral4273g00006 348 PRINTS Disease resistance protein signature 32 46 - -
Pral4273g00006 348 PRINTS Disease resistance protein signature 125 139 - -
Pral4273g00006 348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 184 IPR027417 -
Pral4273g00006 348 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 348 IPR044974 GO:0006952
Pral4273g00006 348 SUPERFAMILY "Winged helix" DNA-binding domain 161 262 IPR036390 -
Pral4273g00006 348 Gene3D - 25 85 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4273g00006 Pral-Chr4273 44931 46912 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4273g00006 1 348 WRKY Transcription Factor Family AT5G45050 30.216 5.90e-42 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4273g00006 - - pcin:129291819 476.863