Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4273g00004 ATGGATGCAACCTTTGCTTTAACGCTCATAGAAGCTGTCTTGATTTTGCTGGGTATAGCAATTTCTAAAGCTGTCAGATTAATCTCTCCACTTCATGATAGTTGTAAAGATGTTGGTGATTCGATTCCCACCGTTTCTTCTCCTTCTAATATCATTGTTGCTCCTTGTGCAACCAAGTATGACGTCTTTCTTAGCTTTAGAGGGGAAGATACTCGTGACACTTTCTCAAGTTATCTCTATGAAGCACTTTGCAAAGCTAACATTCATACTTTTATGGATCACAAGCTCCACAAAGGAGATCATATCTCACTGATTCTTCTGAAAACAATAGAGGAATCAGAGATATCTTTGATCATTTTCTCGAAAGATTATGCTTCTTCAACATGGTGTATGGATGAGCTCGTTCACATTATGAAATGTAAGGATAAGTATGGAAGGCTTGTTGTCCCAATTTTCTACAACGTAGATCCATCAGATATTCGAAAACAGAATGGGAGATTTGGAGATGGATTTGCTAAGGTCAAGCAAAGATTTAAGCACGACCCAAAAAGAGTGCAGGAGTGGGAAAATGCTTTGATCAAATCAGCAAGTCTATCTGGGTGGGATTTAAAAAATATCAGGCCTGAACCCAAACTTGTTAAAAAGATTGTCAAAGATATTTTGAGCAAATTGAATTGCAAGTTGTCCTTTCATGTGGAAGGACTAGTTGGGATTGATGATCAGATTCAGGAAGTTGAAGAGCTACTGAGTGAAGCTCGCATTGTGGGAATATGGGGTATGGGTGGTATAGGCAAGACCACTCTTGCTAGTGCCGTATTTGACAGGTTGAGAGCTGAGTTTGAAGCTTCCTGCTTTGTTGAAGATGTAAGACAACTACTGGAAAAGAAGGGTGGCTTGAATGGATTACAGGAAAAATGCCTTAAAGAATTATTAAAAGATGAGGAGATTAACACTTACAATTTAAGATCTGATTTTGTGAGAAGAAGGCTTCACCGTAAAAAAATTCTTCTGGTACTTGATGATGTGGACAATTTTACAAAAGCTGAAGGTTTAATCAAAGCATGTGATTGGTTTGGGGAAGAAAGTAGAATTATCATCACGTCAAGAAATATGCAAGTGCTTAGAAATACTTCTGCTTCTGCATCTCCAGCAACATATCATGTTCCGGGATTGGATCCGCATCATGCTCTTCATCTCTTTAGCTTGAGCGCTTTCAAGCAAAATCAGCCATTCGAAAACTACCTGGAGTTATCAAAGTGGGTAGTGGATTATTGTCAAGGAAATCCATTAGCTCTGAAAGTGCTGGGTGGCTATCTTCAAGGTAGAGGAAAAGAAGTGTGGGAAAGTGCTTTGGCAAAACTAAATCATGCTTTTTACAGTGACATTTTTGAAGTGTTGAGATTGAGTTTTGATGGACTTGATGACGATCAAAAGGATGTATTTCTTGACCTAGCATTTTTTTTCGAACGAAGGATGGTGGATGTCTCTGAATTGTGCAAGAGCCTCATATGCAGATATTGA 1521 0.3866 MDATFALTLIEAVLILLGIAISKAVRLISPLHDSCKDVGDSIPTVSSPSNIIVAPCATKYDVFLSFRGEDTRDTFSSYLYEALCKANIHTFMDHKLHKGDHISLILLKTIEESEISLIIFSKDYASSTWCMDELVHIMKCKDKYGRLVVPIFYNVDPSDIRKQNGRFGDGFAKVKQRFKHDPKRVQEWENALIKSASLSGWDLKNIRPEPKLVKKIVKDILSKLNCKLSFHVEGLVGIDDQIQEVEELLSEARIVGIWGMGGIGKTTLASAVFDRLRAEFEASCFVEDVRQLLEKKGGLNGLQEKCLKELLKDEEINTYNLRSDFVRRRLHRKKILLVLDDVDNFTKAEGLIKACDWFGEESRIIITSRNMQVLRNTSASASPATYHVPGLDPHHALHLFSLSAFKQNQPFENYLELSKWVVDYCQGNPLALKVLGGYLQGRGKEVWESALAKLNHAFYSDIFEVLRLSFDGLDDDQKDVFLDLAFFFERRMVDVSELCKSLICRY 506
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral4273g00004 506 FunFam Disease resistance protein (TIR-NBS-LRR class) 56 226 - -
Pral4273g00004 506 Pfam NB-ARC domain 241 456 IPR002182 GO:0043531
Pral4273g00004 506 Gene3D - 56 230 IPR035897 -
Pral4273g00004 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 226 484 IPR027417 -
Pral4273g00004 506 ProSiteProfiles TIR domain profile. 58 224 IPR000157 GO:0007165
Pral4273g00004 506 Gene3D - 235 385 IPR027417 -
Pral4273g00004 506 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 60 493 IPR044974 GO:0006952
Pral4273g00004 506 SMART till_3 59 198 IPR000157 GO:0007165
Pral4273g00004 506 PRINTS Disease resistance protein signature 425 439 - -
Pral4273g00004 506 PRINTS Disease resistance protein signature 329 343 - -
Pral4273g00004 506 PRINTS Disease resistance protein signature 254 269 - -
Pral4273g00004 506 Pfam TIR domain 59 226 IPR000157 GO:0007165
Pral4273g00004 506 Gene3D - 391 474 IPR042197 -
Pral4273g00004 506 SUPERFAMILY Toll/Interleukin receptor TIR domain 57 201 IPR035897 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral4273g00004 Pral-Chr4273 32932 34623 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4273g00004 236 494 WRKY Transcription Factor Family AT5G45050 38.636 6.71e-45 167
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4273g00004 - - pcin:129286024 642.114