Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4273g00001 ATGGGTGGTATAGGCAAGACCACTCTTGCTAGTGCCGTATTTGAGAGGTTGAGAGCAGAGTTTGAAGCTTCCTGCTTTGTTGAAGATGTAAGAAAACTGCTGGAAAAGAATGGTGGCTTGAATGCATTACAGGAAAAATGCCTTAAAGAATTATTAAAAGATGAGGAGATTAACACTTACAATTTAAGGTCTGATTTTGTGAGAAGAAGGCTTCACCGTAAAAAAATTCTTCTGGTACTTGATGATGTGGACAATTTTATGGCGGCTGAAAATTTAATCAAAGCATGTGGTTGGTTTGGGGAAGGAAGTAGAATTATTATCACATCAAGAGACATGCAAGTGCTTAAAAATACTTCTGCATTTCTAACATATCGTGTTCCAACAATGTATCACCATGATGCTCTTCATCTCTTTAGTTTGAAAGCTTTTAAGCAAAATCAGCCATTCAAAAACTACTTGGAGTTATCAAAGCGGGCAGTGTATTATTGTCATGGAAATCCTTTAGCTCTAAAAGTGTTGGGTTGCTTTCTTCATGGCAGAGGAAAAGAAGTATGGGACAGTGCTCTGACAAAACTAAATCATACTCTTCACAAGGACATTTTTAAAGTGTTGAAATTGAGTTTTGATGGACTTGATGATGACATGCAGAAGAATGTATTTCTTGACCTAGCATTTTTCTTGAACGTAGGACATGGGATTTCTCTAGATTGTACAAGAGGCTTATATGGCTCTCATGCACGTATTGAGATAAGTGTACTTAAAGAGAGATCCCTCATTTCAGTGGATAGATATGGTAATATTGAGATGCATGCTCTATTAGTGGAGATGGGGCTTGAAATTTCTCAGCAACAATTAATATCTAACCCTGAAAAACCCATTCGACTTTGGAGACCCCAGGATGTTTTTCATTTCATGAAAAATGACAAGTTGATGTAG 936 0.3707 MGGIGKTTLASAVFERLRAEFEASCFVEDVRKLLEKNGGLNALQEKCLKELLKDEEINTYNLRSDFVRRRLHRKKILLVLDDVDNFMAAENLIKACGWFGEGSRIIITSRDMQVLKNTSAFLTYRVPTMYHHDALHLFSLKAFKQNQPFKNYLELSKRAVYYCHGNPLALKVLGCFLHGRGKEVWDSALTKLNHTLHKDIFKVLKLSFDGLDDDMQKNVFLDLAFFLNVGHGISLDCTRGLYGSHARIEISVLKERSLISVDRYGNIEMHALLVEMGLEISQQQLISNPEKPIRLWRPQDVFHFMKNDKLM 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4273g00001 311 PRINTS Disease resistance protein signature 70 84 - -
Pral4273g00001 311 PRINTS Disease resistance protein signature 163 177 - -
Pral4273g00001 311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 223 IPR027417 -
Pral4273g00001 311 Pfam NB-ARC domain 1 198 IPR002182 GO:0043531
Pral4273g00001 311 SUPERFAMILY "Winged helix" DNA-binding domain 199 305 IPR036390 -
Pral4273g00001 311 Gene3D - 1 122 IPR027417 -
Pral4273g00001 311 Gene3D - 129 212 IPR042197 -
Pral4273g00001 311 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 303 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4273g00001 Pral-Chr4273 4999 6659 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4273g00001 1 307 WRKY Transcription Factor Family AT5G45050 33.441 2.06e-41 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4273g00001 - - pcin:129286024 384.03