Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4272g00011 ATGGATGCAACCTTTTCTTTAACGCTTATAGAAGCTATCTTGATTTTGCTGGCTATAGCAATTTCTAAGGCTATCAGATTAATCTCTCCGCTTCCTGATAGTTGTAAAGATGCTGTTGATTCGATTCCCACGGTTTCTTCTCCTTCTAATATCATTGTTGCTCCTTCTGCGACCAAATATGACGTCTTTCTTAGCTTTAGAGGGGAAGATACTCGTGACGCTTTCTCAAGTTATCTCTATGAAGCACTTCGCGAAGCTAACATTCATACTTTTATGGATCACAAGCTCCACAAAGGAGATCATATCTCATCTATTCTCTTGAAAACAATAGAAGAATCAGAGATATCTTTGATTATTTTCTCCAAAGATTATGCTTCTTCAACTTGGTGTATGGATGAGCTCTTTCATATTATGAAATGTAAGGATAAATACGGAAGGCTTGTCATCCCAATTTTCTTCCAGGTAGATCCATCAAATATTCGCAAACAGAATGGGAGTTTTGGAGATGGGTTTGCTAAGCTCAAGCAGAGATTTAAGCACAACCAAGAAAGAGTGCAGAAGTGGGAAAATGCTTTGATCAAAGTAGCAAGTCTATTTGGGTGGGATTCAAAAAATATCAGGCCTGAAGCTAAACTTGTCAAAAAGATTGTCAAAGATATTTTGAGCAAATTGAATCGCAAGTCGTCCTTTCATGTGGAAGGACTAGTTGGAATTGATCATCAGATTCAGGAAGTTGAAGAGCTACTGAGTGAAGCTCGCATTGTGGGAATATGGGGTATGGGTGGTATAGGCAAGACCACTCTTGCTAGTGCCGTATTTGAGAGGTTGAGAGCAGAGTTTGAAGCTTCCTGCTTTGTTGAAGATGTAAGAAAACTGCTGGAAAAGAATGGTGGCTTGAATGCATTACAGGAAAAATGCCTTAAAGAATTATTAAAAGATGAGGAGATTAACACTTACAATTTAAGGTCTGATTTTGTGAGAAGAAGGCTTCACCGTAAAAAAATTCTTCTGGTACTTGATGATGTGGACAATTTTATGGCGGCTGAAAATTTAATCAAAGCATGTGGTTGGTTTGGGGAAGGAAGTAGAATTATTATCACATCAAGAGACATGCAAGTGCTTAAAAATACTTCTGCATTTCTAACATATCGTGTTCCAACAATGTATCACCATGATGCTCTTCATCTCTTTAGTTTGAAAGCTTTTAAGCAAAATCAGCCATTCAAAAACTACTTGGAGTTATCAAAGCGGGCAGTGTATTATTGTCATGGAAATCCTTTAGCTCTAAAAGTGTTGGGTTGCTTTCTTCATGGCAGAGGAAAAGAAGTATGGGACAGTGCTCTGACAAAACTAAATCATACTCTTCACAAGGACATTTTTAAAGTGTTGAAATTGAGTTTTGATGGACTTGATGATGACATGCAGAAGAATGTATTTCTTGACCTAGCATTTTTCTTGAACGTAGGACATGGGATTTCTCTAGATTGTACAAGAGGCTTATATGGCTCTCATGCACGTATTGAGATAAGTGTACTTAAAGAGAGATCCCTCATTTCAGTGGATAGATATGGTAATATTGAGATGCATGCTCTATTAGTGGAGATGGGGCTTGAAATTTCTCAGCAACAATTAATATCTAACCCTGAAAAACCCATTCGACTTTGGAGACCCCAGGATGTTTTTCATTTCATGAAAAATGACAAGTTGATGTAG 1713 0.3765 MDATFSLTLIEAILILLAIAISKAIRLISPLPDSCKDAVDSIPTVSSPSNIIVAPSATKYDVFLSFRGEDTRDAFSSYLYEALREANIHTFMDHKLHKGDHISSILLKTIEESEISLIIFSKDYASSTWCMDELFHIMKCKDKYGRLVIPIFFQVDPSNIRKQNGSFGDGFAKLKQRFKHNQERVQKWENALIKVASLFGWDSKNIRPEAKLVKKIVKDILSKLNRKSSFHVEGLVGIDHQIQEVEELLSEARIVGIWGMGGIGKTTLASAVFERLRAEFEASCFVEDVRKLLEKNGGLNALQEKCLKELLKDEEINTYNLRSDFVRRRLHRKKILLVLDDVDNFMAAENLIKACGWFGEGSRIIITSRDMQVLKNTSAFLTYRVPTMYHHDALHLFSLKAFKQNQPFKNYLELSKRAVYYCHGNPLALKVLGCFLHGRGKEVWDSALTKLNHTLHKDIFKVLKLSFDGLDDDMQKNVFLDLAFFLNVGHGISLDCTRGLYGSHARIEISVLKERSLISVDRYGNIEMHALLVEMGLEISQQQLISNPEKPIRLWRPQDVFHFMKNDKLM 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4272g00011 570 Pfam NB-ARC domain 242 457 IPR002182 GO:0043531
Pral4272g00011 570 Gene3D - 56 222 IPR035897 -
Pral4272g00011 570 Coils Coil 171 191 - -
Pral4272g00011 570 SMART till_3 59 198 IPR000157 GO:0007165
Pral4272g00011 570 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 60 562 IPR044974 GO:0006952
Pral4272g00011 570 ProSiteProfiles TIR domain profile. 58 224 IPR000157 GO:0007165
Pral4272g00011 570 SUPERFAMILY Toll/Interleukin receptor TIR domain 57 201 IPR035897 -
Pral4272g00011 570 Gene3D - 388 471 IPR042197 -
Pral4272g00011 570 PRINTS Disease resistance protein signature 422 436 - -
Pral4272g00011 570 PRINTS Disease resistance protein signature 329 343 - -
Pral4272g00011 570 PRINTS Disease resistance protein signature 254 269 - -
Pral4272g00011 570 FunFam Disease resistance protein (TIR-NBS-LRR class) 56 226 - -
Pral4272g00011 570 Gene3D - 223 381 IPR027417 -
Pral4272g00011 570 Pfam TIR domain 59 228 IPR000157 GO:0007165
Pral4272g00011 570 SUPERFAMILY "Winged helix" DNA-binding domain 458 564 IPR036390 -
Pral4272g00011 570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 482 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4272g00011 Pral-Chr4272 97910 100260 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4272g00011 236 566 WRKY Transcription Factor Family AT5G45050 33.628 1.43e-45 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4272g00011 - - pcin:129286024 727.243