Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4272g00010 ATGGATGCAACTTTTGCTTTAACGCTTATAGAAGCTGTCTTGATTTTGCTGGCTATAGCAATTTCTGCTGCTGTCAGATTAATCTCTCCACTTCATGATAGTTGTAAAGATGTTGGTGATTCAATTCCCACCGTTTCTTCTCATTCTCGTATCATTGTTGCTCCTCCTGCAATCAAGTATGAGGTTTTTCTTAGCTTTAGAGGGGAAGACACTCGTCACACTTTTTCAAGTTATCTCTATGAAGCACTTCGCCAAGCAGGCATTCATACTTTCATGGATGAGAAGATCGAAAAAGGAGATTATATCTCACCGATCCTTCTGAAAACAATAGAGCAATCGGAGATATCTTTGATCGTTTTCTCTAAAGATTATGCTTCTTCAACATGGTGTATGGATGAGCTCGTTCACATTACGAAATGTAAGGATAAGTACGGAAGGCTTGTCGTCCCAATTTTCTACAACGTAGATCCATCAAATATTCGAAAAAAGAATGGGAGATTTGGAGATAGATTTACTAAGCTCAAGCAGAGATTTAAGCACGACCAAAAAAGAGTGCAAGAGTGGGAAAATGCTTTGATTGAAGCAGCAAGTCTATCTGGGTGGGATTCAAAGAATTTCAGGCCTGAATCCGAACTTGTCAAAAAGACTGTCAAAGATGTTTTGAGCAAATTGAAGCGCAAGTCATCCATTCACATGGAAGGCCTGGTTGGGATCAATCATCAGATTCAGAAAGTTGAAGAGTTAGTAAGTGAAGCTCGCACTGTGGGAATATGGGGCATGGGTGGTATTGGCAAGACCACTCTTGCTAGGGCCGTATTTGACAGATTGAAGCCAGAGTTTGAAGCTCTCTGCTTTGCTAAAGATGTGAAACAACAGCTGGCGGAAAGGAATGGATTGGATGAATTGCTAAAAAAAAGCCTTAAAGAATTATTAAAAGATGACGATATTAATGCTTACGATTTAAGATCCGCTTCTGTCAGGACAAGGCTTCAGCGTAAAAAAATTCTTCTCGTACTTGATGATGTGGACAATTTTATAACAGCTGAAGATTTAATCAAAGCATGTAATTGGTTTGGGGAAGGAAGTAGAATTATTATCACATCGAGAGATATGCAAGTGCTTAAAAATACTTCTGCTTCTGCATCTCCAGCAACATATCAAGTTCCGGAATTGGATCCCCATCATTCCCTTCATCTCTTTAGTTTGAATGCTTTCAAGCAAAATCAGCCATTCGAAAACTACTTGGAGCTATCAAAGCGGGTAGTTGATTATTGTAAAGGAAATCCTTTAGCTCTGAAAGTGTTGGGTGGCTATCTCCATGATAGAGGAAAAGAAGTGTGGGAAAATATTGACATGAGTGAACTTAAAGACAGATCCCTCATCTTTGTTTCTGGATGTGGTAATATTCAGATGCATGCTCTACTAACGAATATGGGTCTTGAAATTTCAAAGCAACAATTAAAATCTGATCCTGAAAATCCCATTCGGCTGTCGGGGCATGAGAATATTTATCGTTATTTTTCCAACAATGACAAGCAATTTCCAAACCTGGAGGAAATAAGTCTATGGGATTCAAAAAATCTTAGGGCACTCCCGGATTTGTCTCAAGCCCCTAAGATTGAACGGATAATTCTTCGTGGTTGTGTGAATTTGGGTCAAATCCATTCTTCAACTGTCCCAGAAAAGGATATCAATTTATTTATAAAAGATTGTGGGCCAATGCAAATAAATGTTGGGGGCAGTATGCACGAGAGAAGTTCATCAGGGTTAGTGATTGTGCACAATTCTTTGGATCTTGCCGATTTGGCATTCAATAAAGTGACAATGAAGGTGATGTTATACGGCAAGATGATATGTGGTGTTGGATTTAAGCATGTGAGAATGCCATTGAAAGAGACGGCAGAATTCATGAGAATGGGAATACAAAGTTTGGCGACTTTACTTCCATTTGTGAGGAGAGTTAAATGGTTAGAGAGTCCAATTGAGTTTGGGCATGATTTCAAGCAACATTATACCTATGATGTTAATCATTATTACAATGGAAATACATACTTTAGTATTGCTGTGTGGGTGAGAAGTGATGGAGAAGAAAGGGGGTAG 2100 0.3895 MDATFALTLIEAVLILLAIAISAAVRLISPLHDSCKDVGDSIPTVSSHSRIIVAPPAIKYEVFLSFRGEDTRHTFSSYLYEALRQAGIHTFMDEKIEKGDYISPILLKTIEQSEISLIVFSKDYASSTWCMDELVHITKCKDKYGRLVVPIFYNVDPSNIRKKNGRFGDRFTKLKQRFKHDQKRVQEWENALIEAASLSGWDSKNFRPESELVKKTVKDVLSKLKRKSSIHMEGLVGINHQIQKVEELVSEARTVGIWGMGGIGKTTLARAVFDRLKPEFEALCFAKDVKQQLAERNGLDELLKKSLKELLKDDDINAYDLRSASVRTRLQRKKILLVLDDVDNFITAEDLIKACNWFGEGSRIIITSRDMQVLKNTSASASPATYQVPELDPHHSLHLFSLNAFKQNQPFENYLELSKRVVDYCKGNPLALKVLGGYLHDRGKEVWENIDMSELKDRSLIFVSGCGNIQMHALLTNMGLEISKQQLKSDPENPIRLSGHENIYRYFSNNDKQFPNLEEISLWDSKNLRALPDLSQAPKIERIILRGCVNLGQIHSSTVPEKDINLFIKDCGPMQINVGGSMHERSSSGLVIVHNSLDLADLAFNKVTMKVMLYGKMICGVGFKHVRMPLKETAEFMRMGIQSLATLLPFVRRVKWLESPIEFGHDFKQHYTYDVNHYYNGNTYFSIAVWVRSDGEERG 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4272g00010 699 PRINTS Disease resistance protein signature 329 343 - -
Pral4272g00010 699 PRINTS Disease resistance protein signature 425 439 - -
Pral4272g00010 699 PRINTS Disease resistance protein signature 512 528 - -
Pral4272g00010 699 PRINTS Disease resistance protein signature 254 269 - -
Pral4272g00010 699 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 450 IPR027417 -
Pral4272g00010 699 Gene3D - 391 485 IPR042197 -
Pral4272g00010 699 Pfam NB-ARC domain 251 448 IPR002182 GO:0043531
Pral4272g00010 699 Gene3D - 57 220 IPR035897 -
Pral4272g00010 699 Pfam TIR domain 59 231 IPR000157 GO:0007165
Pral4272g00010 699 ProSiteProfiles TIR domain profile. 58 224 IPR000157 GO:0007165
Pral4272g00010 699 SMART till_3 59 198 IPR000157 GO:0007165
Pral4272g00010 699 FunFam Disease resistance protein (TIR-NBS-LRR class) 56 226 - -
Pral4272g00010 699 Gene3D - 221 382 IPR027417 -
Pral4272g00010 699 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 60 449 IPR044974 GO:0006952
Pral4272g00010 699 SUPERFAMILY Toll/Interleukin receptor TIR domain 57 201 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4272g00010 Pral-Chr4272 67796 72635 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4272g00010 60 465 WRKY Transcription Factor Family AT4G12020 28.571 1.98e-36 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4272g00010 - - pcin:129286024 561.222