Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4272g00009 ATGGGTGGTATAGGCAAGACCACTCTCGCTAGAGCCGTATTTGACAAGTTGAAAGCACACTTTGAAGCTTTCTGCTTCATTAAAAATGTCAGACAAAAGCTAGCAGAAAGAAATGGATTGGATGAATTGCAAGAAAAATGCCTTAAAGAATTGTTAAAAGATGATGATATTAACGCTTACGATTTAAGATCTGATTTTGTGAGAAAAAGGCTTCAGTGTAAGAAAATTCTTCTAATACTTGATGATGTGGACAATTCTATAGCAATTGAAGATTTAAAGAAAGCATGCGATTGGTTTGGGGAAGGAAGTAGAGTTATTATCACATCAAGAGATAGGCATGTGCTTGAGGATGATTCTGTCTCTGCAAGTGCAACATATCATGTTCTGAAATTGGATCCCCATCATGCCCTTCATCTCTTTAGTTTGAATGCTTTCAACCAAAATGAGCCATTGAAATGCTATTTGGAGTTATCGAAGTGGGTAGTGGATTATTGTCAAGGAAATCCATTAGCTCTAAAAGTACTGGGTCGCTTTCTTCATGGCAGAGGCAAAGAAGAGTGGGAAAGTGCTTTGGCGAAACTAAATCAAACTCCTCACAATGACATTTTTAATGTGCTAAAATTGAGTTTTGATGGACTTGATGACATACAGAAGAATGCATTTCTTGATCTTGCATTTTTGTTGAACGCAGGATGGAGGATTTCTCAGGACTATGCAAGACACTTATATGGTTCTATTGCAAATATTGAGATAAATATACTTGAAGAGAGATCCCTCATCTCAGTGGATGATGGTATTGAGATGCATGCTCTACTAATCGATATGGGTCTTGAAATTTCTAAACAACAATTAAAATCTAATCCTGACAATCCCATTCGGCTGTGGAGGCATGAGGATATTTATCGTTATTTTTCCAACAATGACAAGGGGATTGAGGCAATTCGATGCATGTCATTGGATGCAAGCCAAATAGAAAGCATGACATTGAGGGCTAGTCATTTTCAAAGGATGCGTTATTTAATGTTCCTTAATGTTTACAAGTCTGATCAGAGAAATCCTTCAAAGTTGAATATTTGTGAAGAGTTGGATTATCTTTCAAAAGAATTAAGGTTTCTTAGTTGGCAAGAATATCCACTGCCATCTGTGCCATTACAATTTTGTGCTAAGAATCTCATTGAACTTAACATGCCTCGTAGTAATATCCAACAGCTTTGGGATGGAAATCAGCAATTTCCAAATCTAAAGAAAATATATCTATGGAATTCAAAAAATCTCATGGCACTCCCAGATTTGTCTCAAGCCCCGAAGATTGAGTGGATGAGTCTTGGTGGTTGTGTGAATTTAGATCAAATCCATTCTTCAACTGTCCTGGAAAAGGATGTCAATTTATTTATAAAAGATTGTGGGCCAATACAGATAAATATTGGGGGTTAG 1434 0.3668 MGGIGKTTLARAVFDKLKAHFEAFCFIKNVRQKLAERNGLDELQEKCLKELLKDDDINAYDLRSDFVRKRLQCKKILLILDDVDNSIAIEDLKKACDWFGEGSRVIITSRDRHVLEDDSVSASATYHVLKLDPHHALHLFSLNAFNQNEPLKCYLELSKWVVDYCQGNPLALKVLGRFLHGRGKEEWESALAKLNQTPHNDIFNVLKLSFDGLDDIQKNAFLDLAFLLNAGWRISQDYARHLYGSIANIEINILEERSLISVDDGIEMHALLIDMGLEISKQQLKSNPDNPIRLWRHEDIYRYFSNNDKGIEAIRCMSLDASQIESMTLRASHFQRMRYLMFLNVYKSDQRNPSKLNICEELDYLSKELRFLSWQEYPLPSVPLQFCAKNLIELNMPRSNIQQLWDGNQQFPNLKKIYLWNSKNLMALPDLSQAPKIEWMSLGGCVNLDQIHSSTVLEKDVNLFIKDCGPIQINIGG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4272g00009 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 224 IPR027417 -
Pral4272g00009 477 Gene3D - 130 214 IPR042197 -
Pral4272g00009 477 Pfam Leucine Rich Repeat 390 409 IPR011713 -
Pral4272g00009 477 SUPERFAMILY "Winged helix" DNA-binding domain 201 303 IPR036390 -
Pral4272g00009 477 Gene3D - 1 122 IPR027417 -
Pral4272g00009 477 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 463 IPR044974 GO:0006952
Pral4272g00009 477 PRINTS Disease resistance protein signature 165 179 - -
Pral4272g00009 477 PRINTS Disease resistance protein signature 409 425 - -
Pral4272g00009 477 PRINTS Disease resistance protein signature 70 84 - -
Pral4272g00009 477 SUPERFAMILY L domain-like 315 458 - -
Pral4272g00009 477 Pfam NB-ARC domain 1 200 IPR002182 GO:0043531
Pral4272g00009 477 Gene3D Ribonuclease Inhibitor 295 471 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4272g00009 Pral-Chr4272 28049 31363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4272g00009 1 457 WRKY Transcription Factor Family AT5G45050 32.075 1.33e-60 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4272g00009 - - pcin:129286024 555.058