Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4272g00005 ATGCAAGTACTTCATAATGCTTTTGCATTTTCAACATACTCTATTTCAAGATTAAATTTACATGATGCCTTTCATCTCTTTAGTTTGAAAGCATTCAAGCAAAATGAGCCACCTAAAAGTTATATGGAATTATCAGAATCAGTAGTGGATTATTGTCAAGGAAATCCATTGGCCCTTGTAATGTTGGGTTCTTTTCTTCAAGGTAGAGGAAAAGAGGAGTGGGAAAGTTTTTTGGAAAAAACAAAAGAAGCACCACCCAAGTACATTATTGATGTTCTGAAATTGAGTTTTGATAGACTTGATGAGCGCCAAAAGAATATGTTTCTTGACATAGCATTTTTCATCAAGGAAAGAGTTGAAGTTTCTTTGACCCTAATAAGACAATTATATGGCTCTTCTGTAGATATTGACATAAATGTTCTTAAAGAGAGAGCCCTCACTTCATTGGATCATAACGGCTATATTGAGATGCATGATCTTGTGAGGGACATGGGTGTTGAAATTGCTAGAGAACAGTCATTCTCCAATCCTAAAGGCCCTGTTCGACTGCAAAGTTATAAGGACATTTATGATTTTTTCATTAGTAACAAGGTGACTGAGTCAATCCAATGCTTGTCATTGGACACGAGCAAGATAAAAAGGATTCCATTGACAGCTAATGACCTTCAAAGATGCATAATTTAA 684 0.3523 MQVLHNAFAFSTYSISRLNLHDAFHLFSLKAFKQNEPPKSYMELSESVVDYCQGNPLALVMLGSFLQGRGKEEWESFLEKTKEAPPKYIIDVLKLSFDRLDERQKNMFLDIAFFIKERVEVSLTLIRQLYGSSVDIDINVLKERALTSLDHNGYIEMHDLVRDMGVEIAREQSFSNPKGPVRLQSYKDIYDFFISNKVTESIQCLSLDTSKIKRIPLTANDLQRCII 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4272g00005 227 Pfam NB-ARC domain 14 82 IPR002182 GO:0043531
Pral4272g00005 227 Gene3D - 17 101 IPR042197 -
Pral4272g00005 227 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 214 IPR044974 GO:0006952
Pral4272g00005 227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 111 IPR027417 -
Pral4272g00005 227 SUPERFAMILY "Winged helix" DNA-binding domain 89 190 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4272g00005 Pral-Chr4272 16890 17728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4272g00005 13 173 WRKY Transcription Factor Family AT5G45050 36.196 5.97e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4272g00005 - - pcin:129295832 281.182