Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4272g00004 CCTCCTACTACAAAGTATGATGTATTTCTTAGCTTTAGAGGAGAAGATACTCGTCACAATTTTGCAAGTTATCTCTATGAAGCACTTTGTAAAGCAAATATTCAAACTTTTATGGATCACAAACTCCATAAAGGAGAAGATATCTCACCGGTTCTTCTAAGGACGATAGAGGAATCAGAGATATCTGTGATTATTTTCTCTACAGATTATGCTTCTTCAACTTGGTGTTTGGATGAGCTTGTTTACATATTAGAATGTAAGAAAAAATTTGGAAGGATTGTGATGCCTATTTTCTACAAAATTGATCCATCAAATGTTTGCAAACAAAGTGGAAGATTTGGAGATGGCTTTGCTAAACTGAAGCAAAGATTTAAAGACAACCCAAACAAATTACGGAAGTGGAAAAATGCTTTGATCCAATCTACAAGCCTCGCTAGATGGGATTCCAAGAATTTCAGGCCAGAGATCAAACTCGTTAAAAAAATTGTCAAGGATATATTGAGCAAATTGAACTACTGTACATCGTCATCATGTCATCTTGAAGGACTTGTGGGCATTAATCATCAAATTGAGAAAATTGAAGAACTATTGATTGATGCTCGGATTGTGGGAATATGGGGCATGGGTGGTATAGGTAAGACTACACTTGCCAAGGCCGTGTTTCACAATTTGAAAGCACAATTTGAAGCTTCCTCCTTTGTTGGAAATGTAAGAGAACAACTAGCAAGAATTGGTCTGAACAAATTAATGGAAGAAAGCCTTAAAGAATTATTAAAAGATGAGGGCCTTCACATCTACAACATGAAATCCACTTTTGTGAAACGCAGGCTCCAACAAAAAAAGATTCTTTTGATACTTGATGATGTGGACAATTTATTAACAGCTGAAGATTTAACCAAATTGTGTGATTGGTTTGGAGAAGGAAGTAGAATTGTTGTTACATCAAGAGACATGCATGTTCTCAAGAATGCTTCTGCATCTGCAACATATCATGTTCAGAAATTAGAGTTCGGTCATGCTCTAAATCTTTTCAGTTTGAAAGCATTTAAGCAAAATGATCCATTTAAAAGTTATTTCGAGTTATCAAAGTTGGTTGTTGATTATTGTCAGGGAAACCCATTAGCTCTTGTAGTGTTGGGTTGCTTTCTGTACAATAGAACAAAACAACAGTGGGAAAGTGCATTGGAAAAACTAAAACAAGCTCCGCACAAGGATATTTTTACTGTGCTCAAATTGAGTTTTGATGGACTTGATGAGAAGCAAAAGAATGTGTTTCTTGACTTGGTACATTTATCGAGCGAAACAAGTTATAAGATTTCTTTAAACTTTATTAGAGGCTTCTATGACTTTTCTGTATATATTGAGATAAGTGTCCTCAAAGAAAGATCTCTTATTTCGATGGATCAATTTGGTGGAATTGAGATGCATGATCTTGTAAGAGAAATGGGTCAAGAAATTTGTAGACAACAATTGATCATTGATCCTGAAAGACCTATTCGGCTGTGGAAACACAACGATATTTATCATTTGTTCATCAATAAAAAGGGGAGTGGGACAATTCGATGCATATCTTTGGATATGTGCAAGACAAAAGAGATGACATTGCAGGCTAATACCTTCAGAAAGATGAATGCCTTAAAATTTCTCAAGTTTTACAAGTCTGATTTTAAAAAGCCTTCAAAAGTGTATGTTTATGAAGGTCTTGATAATCTCCCTGAAGAACTAAGGTTTTTCTTTTGGGAAGATTATCCTCTGCCATCTGTACCACTAAGCTTTTGTGCAGAGAATCTCATGGAACTTGAAATGCCTCATAATGAACTCCAACAACTTTGGGATGCAGATCAGCATTTCCCGAATTTAGGAGTGATGAATCTGACTGCGTCAAAAGATCTGGCTGAGCTTCCAAATCTCTCTCAAGCCCCCAATATGAGTATGGTATATCTTGATGAATGTGTGAACTTGACTCAAATTTATTCTTCAAGTAGCTTGAGCAAGCTTTCCCATTTATCCATACGAGATTGCAAAGACCTGAGACATATAAGCATTGGTGGCAATATCAAGGAGACAAGTTCTGGGTTAGTAGCTGTCTACAATTTTCTGGATCTTGGCAACTCGTTGTTCCATAAATTGATTGTGAAGCTCTTTGTCTCAAACGATGGCAATATTTTCTCTGGTTTTCGGGTTAAACTCGTGTCAGTATCATTGTCAGAGATATTATCAACAGATCAGTACATGAACAATACTGAGAGTTCAAAGTTGAAATTGTCATCTTTGCTTCCATTTGTTACTTCGCTTCGCTGGTTAGATCTTATGGAGTTTGGCAATTTCAGCGAACGTTTCAACTTTCTTTCTGAACATGAAGAGCTTAAGAATATCCATGCCAAAGATGTAGTCAACGAACTCAGAGCGATGGTGAGAAAGCCATTAGAGGTTGAAGAAAAGAGAATAACAGAAGAGGTGATCACAGATTACACTTCTTATTATCATGGAAAAAGGAAGCCATTGGAGATCGAAGAAGAGATAATGACAGAAATAATGGAATGCTGTTGCAGTACAAGCAATAATAGATTAATCAGAGCTCCTAATAGCATCACACGCTGGCCATTACTGACACAGGTGACATTGCAGAAAAGTGAAATTACTGGGTGTGAAGTTTGGGACAATCCTGGGATTTCAATGTTGAAATCACTTGCAGAATCTTGTTGTTGCAGTAGGATTAAACCTGTCATAGATATAAGAATTTCACTGGATAAAGAAGCAACGATATGGGGTGGCAATAATGATATTGTAGCAGAAACAAAATGGGACATGCCTAATTTTAGCATCGATATATGGCAAGAATTGGCTGGAGATTTCTTTGTTCATTTTCCCATTCGCTTAGATCACGAATCCATTTCGTTTCTTTTATGGTTTTCAAGAAGTAGCAGCAGCAGGTGA 2937 0.3657 PPTTKYDVFLSFRGEDTRHNFASYLYEALCKANIQTFMDHKLHKGEDISPVLLRTIEESEISVIIFSTDYASSTWCLDELVYILECKKKFGRIVMPIFYKIDPSNVCKQSGRFGDGFAKLKQRFKDNPNKLRKWKNALIQSTSLARWDSKNFRPEIKLVKKIVKDILSKLNYCTSSSCHLEGLVGINHQIEKIEELLIDARIVGIWGMGGIGKTTLAKAVFHNLKAQFEASSFVGNVREQLARIGLNKLMEESLKELLKDEGLHIYNMKSTFVKRRLQQKKILLILDDVDNLLTAEDLTKLCDWFGEGSRIVVTSRDMHVLKNASASATYHVQKLEFGHALNLFSLKAFKQNDPFKSYFELSKLVVDYCQGNPLALVVLGCFLYNRTKQQWESALEKLKQAPHKDIFTVLKLSFDGLDEKQKNVFLDLVHLSSETSYKISLNFIRGFYDFSVYIEISVLKERSLISMDQFGGIEMHDLVREMGQEICRQQLIIDPERPIRLWKHNDIYHLFINKKGSGTIRCISLDMCKTKEMTLQANTFRKMNALKFLKFYKSDFKKPSKVYVYEGLDNLPEELRFFFWEDYPLPSVPLSFCAENLMELEMPHNELQQLWDADQHFPNLGVMNLTASKDLAELPNLSQAPNMSMVYLDECVNLTQIYSSSSLSKLSHLSIRDCKDLRHISIGGNIKETSSGLVAVYNFLDLGNSLFHKLIVKLFVSNDGNIFSGFRVKLVSVSLSEILSTDQYMNNTESSKLKLSSLLPFVTSLRWLDLMEFGNFSERFNFLSEHEELKNIHAKDVVNELRAMVRKPLEVEEKRITEEVITDYTSYYHGKRKPLEIEEEIMTEIMECCCSTSNNRLIRAPNSITRWPLLTQVTLQKSEITGCEVWDNPGISMLKSLAESCCCSRIKPVIDIRISLDKEATIWGGNNDIVAETKWDMPNFSIDIWQELAGDFFVHFPIRLDHESISFLLWFSRSSSSR 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4272g00004 978 ProSiteProfiles TIR domain profile. 4 170 IPR000157 GO:0007165
Pral4272g00004 978 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 142 IPR035897 -
Pral4272g00004 978 Gene3D Ribonuclease Inhibitor 516 691 IPR032675 -
Pral4272g00004 978 SMART till_3 5 144 IPR000157 GO:0007165
Pral4272g00004 978 SUPERFAMILY L domain-like 519 882 - -
Pral4272g00004 978 Pfam NB-ARC domain 189 404 IPR002182 GO:0043531
Pral4272g00004 978 SUPERFAMILY "Winged helix" DNA-binding domain 405 510 IPR036390 -
Pral4272g00004 978 Pfam TIR domain 5 186 IPR000157 GO:0007165
Pral4272g00004 978 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 759 IPR044974 GO:0006952
Pral4272g00004 978 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 428 IPR027417 -
Pral4272g00004 978 Gene3D - 3 176 IPR035897 -
Pral4272g00004 978 FunFam Disease resistance protein (TIR-NBS-LRR class) 2 172 - -
Pral4272g00004 978 PRINTS Disease resistance protein signature 276 290 - -
Pral4272g00004 978 PRINTS Disease resistance protein signature 369 383 - -
Pral4272g00004 978 PRINTS Disease resistance protein signature 661 677 - -
Pral4272g00004 978 PRINTS Disease resistance protein signature 202 217 - -
Pral4272g00004 978 Gene3D - 335 418 IPR042197 -
Pral4272g00004 978 Gene3D - 177 332 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4272g00004 Pral-Chr4272 11556 14846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4272g00004 6 680 WRKY Transcription Factor Family AT4G12020 29.539 1.97e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4272g00004 - - pcin:129286024 984.171