Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4271g00070 ATGGCACATCTAGCACTATCCTCTTCTATCACTTACAAATGGACTTTTGATGTGTTTCTTAGTTTTCACGGTGAAGATACTCGCTTAGGTTTCACCAGCCATCTCTATCGTTCTCTACGTCAAAGTGGAATTCATGCCTTTCTCGATGATGAATTCATTAGGATTGGAGAAAATATCACACCCGCGCTTTTTGAAGCTATACAAAAATCAAGAATAGCCATCATAGTTTTCTCAGAAAACTATGCAAACTCAACGTTTTGTTTGCAAGAACTTGAAAAGATTCTAGAGTGCTTCAAGGAACAGAATCGGTTGATATATCCAGTATTTTGTTATGTGGATCCATCAGAACTACGACGTCCCAGAGGAAGCTATGCAGCAGCATTGGCTCGACTGGAGGAAAGATTCAAGGACAATCCGCACAAGGTGGAAAAGTGGAGGCTGGCTCTGTCTCAAGCTGCTGACCTCAGAGGCTGTCATCTCAAACCCAAGATTGCAAATGAACAAGAGTTTATTACAAGGATCACGAATGTTGTTGCTGCTAGGATTAACCGGTTGCCTTTATATGTTGCAAAATATCCCGTTGGACTTGAGGCTCGAGCCAAGAGAGTTATCTCTCGTTTACATCTTTGGTCCACAAAGGAAATTAAAATGATAGGAATTTGGGGAGCTGGTGGAATAGGTAAATCAACTATTGCTAGGGCTGTATATAATTCAATTGCTGATAATTTTGAAGGCTCGTATTTTTCTCCTAGTGTAAGAAAGGACTCCAAAATGCCACATGGTTTGTCACATCTTCAAGAGACATTATTGCGTGAATTAGTCATGGAGAAAGATCTTAAATTGAACGATTATCATGAGGGAATACCAATAATAGAACATAGGCTTGGTCAGAAGAAGATTCTTTTGATTCTTGATGATGTTGACGAATTAAACCAATTAGAAGCACTTGCTGGAAGTTGCAATTGGTTTGGTTGTGGAAGTAGAATCATCATCACGACCAGAGATAAGCAATTACTTGTATGTCATGATGTTACAAGCATTTATGAAGTCGAGGAATTAAATTATAAGGAATCTCTTAAGTTGCTTAGTTGGTGTGCATTTAAAAAAGAAAATGTAGATTCCAACAACATGGAGGCTTGCAATCGTGCAATCCGTTATTCGTGTGGCTTTCCATTAGTTTTAGAATTGATTGCTTCTAAATTGTGTGGTAAAAGAGTTGATCTCTGGAGTTCTGCATTGGATAGATTAAAAAGCACACCACATCAAAGAGTTTTGGATGCCTTGAAATTAAGCTATGATAGTTTAGAGCGAGTAGAGAAACAAGTTTTCCTTGACTTGGCTTGCTTTTTCAATGGTGGGAAATTAGCATATGTCAATCATATCTTGCACTGTGTTCGGGGAATCCAACAACCAGAATATGTTATTGAAGTGCTGATTGATAAATCCCTTATAAAGCTTGAACAAGATCTTGTAACAATGCATGACTCGATAGAAGATGCCGGTAAAGAGATTGTTCGACAAGAATCATCATATCAGCTTAGCAAACAAAGCAGATTATGGTCCTATCAGGACATCCTTCAAGTCTTAGAACAAGACAATGGGACAAACAAAATTGAAGCCATAATTCTAGACTTGCCTGAAAATATAGAAGTACAATGGAGTGGGGAGGCATTTGTGGAGATGAAAAGTCTCAAAATGCTTGTGATAAAACAAGCATGCTTTTCTGAATGTCCCAAATATCTGCCAAAGAGTTTAAGGTGGTTGGAATGGAAAGGGTACTCTTTCAAATTTTTCCCATCTTTGTGTGCAACTGAACTTGTCTCTCTTGACTTGTCCTTCAGTTCTTGTGAATTGCTCCAACCATTTGACAAGAAATTTCGCAATTTAAGTAGTATGAAGTTAACAAATTGCAAATCTCTACAACAAATACCAGACTTATCTGGGGCTTCTAATATAAGAGAATTATGTCTTGATGGTTGCACAAATTTGATTGAAATTCATGATTCAGTTGGATGTTTAAATAAATTGAGAGAATGGAGTGCTATGCGATGCAAAAACTTGAAGATTTTGCCATCTTGCCTAAGGTTGACATCTCTTGAACATCTCAACCTCTTCGGTTGTTCAAGTCTTCAAAGATTTCCAGAAGTATCTATCTTGATGGAAGAAATGCAGACACTTGATTTGGACAAGACAGCGATTATTGAATTGCCATCTTCAATCTGCAATCTTATTGGACTTCGAGTCTTAAGCATGGAGGAATGTCCTAATCTTATGCAGCTACCAGCTAGCATTTGTACGCTACCAAACCTTTGGAAACTAACAGCAAATTCTTGTGAGCAAATGAGTCATTTTAAGAAATGTGAAGGTGGAGATGAAGCAACAAACTTAGATTGCTCGCATATTGGGGGGATGCCACCAAACTTGGAAAAATTTAGTGCCATATGTTGCTCATCATTGACTGAGTTATCCAAAATCAAAGTATTGGAGCAGGCTATCAACTTTCAATGTGGGAAAAAAAACTTTATTTTGCCTGGAGAAAAATTTCCAAAAGGGCTCCATAAGTATGATTGGGGAAATTCTGTGTCAATTTGGGTTCGTGACGTGCTCCCAACAACTTTTCTTTGGATTCTTGTCAAAGATGTCCAGGATTATGTCTACAATTGTGAATTCTCAGTGCACATCAATGAGGAAACCAAGCTGGAGATATGTATTAAGCACGAGTCTGAATCTTATGGGGATTTAGAAATTTTGGAAGCTGGCGGTTATAAGGGTACAACATATGCAAGAGGTCATTCCTACGACAACTTGACAGAGTTGCGCCTTACAGATTGCAACAGATGTCGCAGTATTCCTGCACTTGGCCAACTACCTGCTCTTAGGTCCTTAACTATTGAAACATTACGAAGTTTGGTGGCTGTGGGTTCTGAGTTTTCCAAGGCAGATGATTGGGCTTCACTTATACCATTTCCATCCCTTGAAACTCTCAAGCGTCTGGGCATTCAACGATGTCCACTGCTTGCTTCTTCTATCCCAAAGTGTCCAATCATTCAAAAGATTGCTATAATTAAAAGTCCAAATGTAGCGTTGCAAGAGCAAGAATTACCACCTTCCCTACGCCGTCTGGCAATTTCAGGTGGGCACGGGTTGGGGTCTCTGTCCGTAGAGTTGCATATTGAAGATTTAATTGTCTGGGATTGTTCTGATGCGGTGCCACCTCCACTGATCCATATCCCCCCATCAGTGAAACAGCTAATTATAGGAGGCTGTGAAAATCTCAACGCTTTTCGGGTTCCAAAGGCACCTCTTGTTCATGTCCGAAAGATTTCCCTTTACTATTGCAAGTTTCTAACGTCCTTGTTTGATAACATGGAGTGTCTTCTTCCAAATTTAGAAAAGCTTAAAATAAAAGGATGTCCAAAAATGGAGCCATTCTCACCAGGGTTGTTACCATCCAGTTTAAAACAACTTAAGATAAGAGAGTGTGACAAGTTATTATCATGTCATGCGAAATGGCATCACCTTCCAACTATCATTAAGCTTGTCATCTCTACTGATTCTGACACATTGCATTGCATAGGGCTTCAACACCTAACCTCTCTTCAACAACTAGAGCTTCGGTATTCTGACAAGCTTGAGAAAATAGAAGGAGGAATGATGCCTCCTTCCCTACTAAAGCTCCGCATTAGGGATTGCCCGCTTCTCGAAGAGCGATGCCTCGACAAGGATGAGGAAATTTGGCCAAAAATCTCTCACGTTCCATACATCAGTTTAAATGGCAGACGTTTAAGAGCATATCTTGAAGACCAAGACATGAATGATGCAACAATCCTTGAAGACCAAGCAATCTTTGAAGACCTCCAAGACAATGATGCAACAATTCAGGTACAGCAGTCACCATCACCATCAAGGTCGGAGAGATGA 3921 0.3953 MAHLALSSSITYKWTFDVFLSFHGEDTRLGFTSHLYRSLRQSGIHAFLDDEFIRIGENITPALFEAIQKSRIAIIVFSENYANSTFCLQELEKILECFKEQNRLIYPVFCYVDPSELRRPRGSYAAALARLEERFKDNPHKVEKWRLALSQAADLRGCHLKPKIANEQEFITRITNVVAARINRLPLYVAKYPVGLEARAKRVISRLHLWSTKEIKMIGIWGAGGIGKSTIARAVYNSIADNFEGSYFSPSVRKDSKMPHGLSHLQETLLRELVMEKDLKLNDYHEGIPIIEHRLGQKKILLILDDVDELNQLEALAGSCNWFGCGSRIIITTRDKQLLVCHDVTSIYEVEELNYKESLKLLSWCAFKKENVDSNNMEACNRAIRYSCGFPLVLELIASKLCGKRVDLWSSALDRLKSTPHQRVLDALKLSYDSLERVEKQVFLDLACFFNGGKLAYVNHILHCVRGIQQPEYVIEVLIDKSLIKLEQDLVTMHDSIEDAGKEIVRQESSYQLSKQSRLWSYQDILQVLEQDNGTNKIEAIILDLPENIEVQWSGEAFVEMKSLKMLVIKQACFSECPKYLPKSLRWLEWKGYSFKFFPSLCATELVSLDLSFSSCELLQPFDKKFRNLSSMKLTNCKSLQQIPDLSGASNIRELCLDGCTNLIEIHDSVGCLNKLREWSAMRCKNLKILPSCLRLTSLEHLNLFGCSSLQRFPEVSILMEEMQTLDLDKTAIIELPSSICNLIGLRVLSMEECPNLMQLPASICTLPNLWKLTANSCEQMSHFKKCEGGDEATNLDCSHIGGMPPNLEKFSAICCSSLTELSKIKVLEQAINFQCGKKNFILPGEKFPKGLHKYDWGNSVSIWVRDVLPTTFLWILVKDVQDYVYNCEFSVHINEETKLEICIKHESESYGDLEILEAGGYKGTTYARGHSYDNLTELRLTDCNRCRSIPALGQLPALRSLTIETLRSLVAVGSEFSKADDWASLIPFPSLETLKRLGIQRCPLLASSIPKCPIIQKIAIIKSPNVALQEQELPPSLRRLAISGGHGLGSLSVELHIEDLIVWDCSDAVPPPLIHIPPSVKQLIIGGCENLNAFRVPKAPLVHVRKISLYYCKFLTSLFDNMECLLPNLEKLKIKGCPKMEPFSPGLLPSSLKQLKIRECDKLLSCHAKWHHLPTIIKLVISTDSDTLHCIGLQHLTSLQQLELRYSDKLEKIEGGMMPPSLLKLRIRDCPLLEERCLDKDEEIWPKISHVPYISLNGRRLRAYLEDQDMNDATILEDQAIFEDLQDNDATIQVQQSPSPSRSER 1306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4271g00070 1306 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral4271g00070 1306 Pfam NB-ARC domain 200 434 IPR002182 GO:0043531
Pral4271g00070 1306 Gene3D - 353 442 IPR042197 -
Pral4271g00070 1306 SUPERFAMILY L domain-like 540 829 - -
Pral4271g00070 1306 Gene3D - 182 347 IPR027417 -
Pral4271g00070 1306 SUPERFAMILY L domain-like 914 1248 - -
Pral4271g00070 1306 Gene3D - 12 181 IPR035897 -
Pral4271g00070 1306 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 782 IPR044974 GO:0006952
Pral4271g00070 1306 Gene3D Ribonuclease Inhibitor 513 686 IPR032675 -
Pral4271g00070 1306 Gene3D Ribonuclease Inhibitor 884 1031 IPR032675 -
Pral4271g00070 1306 Gene3D Ribonuclease Inhibitor 1032 1253 IPR032675 -
Pral4271g00070 1306 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Pral4271g00070 1306 Pfam TIR domain 16 178 IPR000157 GO:0007165
Pral4271g00070 1306 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 157 IPR035897 -
Pral4271g00070 1306 Gene3D Ribonuclease Inhibitor 694 836 IPR032675 -
Pral4271g00070 1306 PRINTS Disease resistance protein signature 294 308 - -
Pral4271g00070 1306 PRINTS Disease resistance protein signature 387 401 - -
Pral4271g00070 1306 PRINTS Disease resistance protein signature 694 710 - -
Pral4271g00070 1306 PRINTS Disease resistance protein signature 217 232 - -
Pral4271g00070 1306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 446 IPR027417 -
Pral4271g00070 1306 SUPERFAMILY "Winged helix" DNA-binding domain 423 530 IPR036390 -
Pral4271g00070 1306 SMART till_3 15 155 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4271g00070 Pral-Chr4271 616782 624113 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4271g00070 16 784 WRKY Transcription Factor Family AT4G12020 30.932 1.06e-74 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4271g00070 - - pcin:129289024 1048.88