Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4271g00066 ATGTCTGCAGAACTGCCGATTGAGGATATACCAGCTCAGATGGTTGGCTTCTTCCAAAGGAAAAAGGTGAACCAGGACGTGCTTGATCGACTGAGCAAAACACTGCGTTCTGCTGTACCTTTGCTTAAGTTTTATGCGCTTCAGCAGCCCACAGATCTTGCTGAGGAAAAGCGGTATCTTCATCTCTATCATGTTGTCTTTAAACTACGCTTACAGATGGATATAATTGGTGACAATGACGAAGTTACTGAACTTCAGTACAGCGAACTGGAAGAAGTTATCCGCGAAATGGAAGAGCATCTTGAAACGTTTGATAATCGACAGAATTATGATGCTGTTTATCCAATCACTTATAGCACCCGACTTGACCTATGGGAAATAAAGGAATTTATTGGAGGAGGCAGATTTGGAATTGCTCATCGTGGCCTCAACAGAAAAACTGGAGAATCATGTGCAATAAAGGAAATACTTGACATTGACGATGCTGGAGTTGCCGAATCTCTAGATCGGAAAAAGTGGGACTCTATTTTCACGAGTTTCATATGCTCAAATACTTTCATTTATAATCCCTCATATGCCTTGGATATTAAACCGCATAATATACTTGTGGATTCTGAGAACAATATAAAGCTTGCTGACTTTGGTTTGGCGAAGCAGCTAGCTGAATCGGCGGGCGATCACTCTTTGTCGGGAACCATATGTTATACAGCTCCGGAGGTTATAGAGCATGGAGCATATAACAGCTCGGGTGAAGCCTCTACTGCTGATATATGGAGTTTGGGCTTTGTAGTCATTGAAATGTTCACGGGCAAGCATCCTTGGCCTGATTGCAGTCTGCCGTGA 843 0.4282 MSAELPIEDIPAQMVGFFQRKKVNQDVLDRLSKTLRSAVPLLKFYALQQPTDLAEEKRYLHLYHVVFKLRLQMDIIGDNDEVTELQYSELEEVIREMEEHLETFDNRQNYDAVYPITYSTRLDLWEIKEFIGGGRFGIAHRGLNRKTGESCAIKEILDIDDAGVAESLDRKKWDSIFTSFICSNTFIYNPSYALDIKPHNILVDSENNIKLADFGLAKQLAESAGDHSLSGTICYTAPEVIEHGAYNSSGEASTADIWSLGFVVIEMFTGKHPWPDCSLP 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4271g00066 280 Gene3D Transferase(Phosphotransferase) domain 1 179 280 - -
Pral4271g00066 280 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 195 276 - -
Pral4271g00066 280 Coils Coil 87 107 - -
Pral4271g00066 280 SMART serkin_6 125 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00066 280 SUPERFAMILY Protein kinase-like (PK-like) 115 278 IPR011009 -
Pral4271g00066 280 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Pral4271g00066 280 ProSiteProfiles Protein kinase domain profile. 7 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00066 280 Pfam Protein kinase domain 194 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00066 280 Gene3D Phosphorylase Kinase; domain 1 80 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4271g00066 Pral-Chr4271 525341 529763 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4271g00066 195 274 MAP Kinase Kinase Kinase AT1G54960 54.217 1.03e-17 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral4271g00066 Pkinase 1.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4271g00066 - K11228 pcin:129285400 109.768