Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4271g00057 ATGGAATACATCCCACCAGGTTCACTGAAGAAATATATATCGGAAAGGGGTGTTCTATGTGAATCTTTAATTCAAAATTTCACTGTACAAATTCTCTCTGGTTTGGTTTACCTGCATAGCAGAAGAGTTGTTCACAGGGACATAAAGCCAGACAATCTGCTTGTCGATTCTAACAACATAGTAAAGCTGGTTGACTTTGGTTTGGCTAAGCATTTGGGAGAATCTGTGGGCAAGCACTCCCAGTTGGGAACTCCATATTATGCAAGCCCAGAGGTTCTTCAAAAATTAGAATATGAGAGCTCGCGTGAAGCTTCTGCTGCTGATATATGGAGTTTGGGTTGCGTAATCATTGAAATGTTCTCAGGGAAGCATCCTTGGCCTCGTTTGGAATGGCAACAGGCTTTCTATAGAGTTTGTCTTAAAGAGGAACATCCGGACATACCAAAAGAGTTATGCCAAGATGGCAAAGATTTTCTCCAACTCTGCTTCAGAAGAACTCCAGCCGAGCGGCCATCTGCTGTGGCATTACTAGACCATCCCTTTGTAAAAGCAAAAACAACTTAG 564 0.4238 MEYIPPGSLKKYISERGVLCESLIQNFTVQILSGLVYLHSRRVVHRDIKPDNLLVDSNNIVKLVDFGLAKHLGESVGKHSQLGTPYYASPEVLQKLEYESSREASAADIWSLGCVIIEMFSGKHPWPRLEWQQAFYRVCLKEEHPDIPKELCQDGKDFLQLCFRRTPAERPSAVALLDHPFVKAKTT 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4271g00057 187 ProSiteProfiles Protein kinase domain profile. 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00057 187 Gene3D Transferase(Phosphotransferase) domain 1 1 187 - -
Pral4271g00057 187 Pfam Protein kinase domain 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00057 187 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 184 - -
Pral4271g00057 187 PRINTS Tyrosine kinase catalytic domain signature 151 173 IPR001245 GO:0004672|GO:0006468
Pral4271g00057 187 PRINTS Tyrosine kinase catalytic domain signature 37 55 IPR001245 GO:0004672|GO:0006468
Pral4271g00057 187 PRINTS Tyrosine kinase catalytic domain signature 1 13 IPR001245 GO:0004672|GO:0006468
Pral4271g00057 187 PRINTS Tyrosine kinase catalytic domain signature 107 129 IPR001245 GO:0004672|GO:0006468
Pral4271g00057 187 SUPERFAMILY Protein kinase-like (PK-like) 1 183 IPR011009 -
Pral4271g00057 187 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Pral4271g00057 187 SMART serkin_6 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4271g00057 Pral-Chr4271 446853 448807 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4271g00057 1 183 MAP Kinase Kinase Kinase AT5G66850 51.075 6.64e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral4271g00057 Pkinase 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4271g00057 - - pcin:129285400 231.106