Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4271g00056 TATGGGACTGTTTATGTTGCCTATAACAGGGAAATCAAAAAATTATGTGCAGTCAAGGAACTTAAAGATGTTTTCAAACTTGAAAATGGAGAATCTATAAGAAAGGAAATCAAAATTCTCAGCCAACTGGAACATCCCAATATTGTGAAATATTTTGGCAATGAAATAGCTGGACACCACATTTCTTTATACATGGAGTACATCAAACCAGGTTCACTAAAGAAATATATATCAGAACGAGGTATTTTATGTGAACCTTTA 261 0.3257 YGTVYVAYNREIKKLCAVKELKDVFKLENGESIRKEIKILSQLEHPNIVKYFGNEIAGHHISLYMEYIKPGSLKKYISERGILCEPL 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4271g00056 87 Gene3D Transferase(Phosphotransferase) domain 1 1 87 - -
Pral4271g00056 87 Pfam Protein kinase domain 1 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00056 87 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 86 - -
Pral4271g00056 87 SUPERFAMILY Protein kinase-like (PK-like) 1 85 IPR011009 -
Pral4271g00056 87 ProSiteProfiles Protein kinase domain profile. 1 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4271g00056 Pral-Chr4271 420913 421877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4271g00056 1 79 MAP Kinase Kinase Kinase AT5G66850 45.783 8.09e-20 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral4271g00056 Pkinase 8.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4271g00056 - - pcin:129285400 88.9669