Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4271g00055 ATGGTCAGCAGCTTCAGTCAAACAGGGCGACTTACCTCGGCAGCCCTCTGGTTCTCTCTCCTTATTTTGCAGTCCCAATCCAACTACTTGCTTCTTCCCTCCTCTGCAGCTCCCATTCACAGTGTGGTCTCTCTCTTCAGGTTTTGGTCTTTCTTTTTCTATACCCAGACAAGTAGTTGGATTATTGGGCATGTCTGCTCGAGGTTTAATGTGCTCCTCTCTGGCATGTTGGCCCAGAAGAAGAATGATTCATCCCAAAAGCTCTCACATTCAGAAACCACCATTGATGCTGCTTACTTAGAAAACGATGTATTGGGGATGACCTCAACTCCGACTGTTCCAAGACCCATGCCGGATAAAATTTCTCCGGCTTCTCTCATCAAGCACGATACAGAGATGGCCGAGAAGCTGGAAGTGGTAACTGATAGACCTGAGTCGATTTTGGGTTTGAGGGAGAGTACTGTATGGGGAAATTGTTCACATCTCAAAGATCGTGTGGCCTCATTCATGAAAGCCCCCATCGCTGCAAAACTTGTGGTGGTGGGAGGAGCTCTTGTTTCCTTGATTGCAGTGCTTTTACGGCGTATAATAATAAGGCCTCAATTTCGTGTCTACTTGGGAATAAGGAGACCCAACATTAACAACTCCCCACTGGAAGGAGATATCAACTCTATTGAAGAAGCTATCAACATTGATAGGGTCATTCAAGAGGATGATTCTGCTGTTAATTCAGTCTCTCGTACCACCAATCTTAGCCCATGGGAAAGAGTGGAACGTATTGGGGCTGGTGGATATGGGATTGTTTATGTTGCACGCCATAGGGAAACCGGAGCCTTTTGTGCAGTAAAGGAACTGAATGACATTCACAAACTTCCGAAGGTAGAATCTTTTAAAAGGATTGGACGCCACATATTTCTATACATGGAATACATCCAACCAGGTTCACTGAAGAAATATATCTCAGAACGAGGGGGTTTACTTGAGCCTTTAATTCAAAATTTCACTGCACAAATTCTCTCTGGGTTGGATTACCTGTGTAATGAAAGAGTTGTTCACAGGGACATAAAGCCAGACAATCTACTTGTCGATTCTAACAACATAGTAAAGCTGGTTGACTTTGGTGTGGCGAAGCATGATTGA 1140 0.4439 MVSSFSQTGRLTSAALWFSLLILQSQSNYLLLPSSAAPIHSVVSLFRFWSFFFYTQTSSWIIGHVCSRFNVLLSGMLAQKKNDSSQKLSHSETTIDAAYLENDVLGMTSTPTVPRPMPDKISPASLIKHDTEMAEKLEVVTDRPESILGLRESTVWGNCSHLKDRVASFMKAPIAAKLVVVGGALVSLIAVLLRRIIIRPQFRVYLGIRRPNINNSPLEGDINSIEEAINIDRVIQEDDSAVNSVSRTTNLSPWERVERIGAGGYGIVYVARHRETGAFCAVKELNDIHKLPKVESFKRIGRHIFLYMEYIQPGSLKKYISERGGLLEPLIQNFTAQILSGLDYLCNERVVHRDIKPDNLLVDSNNIVKLVDFGVAKHD 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4271g00055 379 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 155 378 - -
Pral4271g00055 379 SUPERFAMILY Protein kinase-like (PK-like) 252 378 IPR011009 -
Pral4271g00055 379 Gene3D Transferase(Phosphotransferase) domain 1 236 379 - -
Pral4271g00055 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Pral4271g00055 379 Pfam Protein kinase domain 301 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00055 379 ProSiteProfiles Protein kinase domain profile. 254 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00055 379 SMART serkin_6 254 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00055 379 ProSitePatterns Protein kinases ATP-binding region signature. 260 283 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4271g00055 Pral-Chr4271 372783 375884 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4271g00055 252 378 MAP Kinase Kinase Kinase AT5G66850 43.137 1.15e-30 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral4271g00055 Pkinase 1.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4271g00055 - - tcc:18591269 125.946