Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4271g00050 ATGTTCGCCCAGAAGAAGAATGATTCATCCCAAAAGCTCTCACATTCAGAAGCCACCATTGCTGTTGCTTATGGGAAAAACGACATGGCCGAGAAGCTGGAAGATGTAACTGATAGAAAGAGTACTGTGCGGGGAAATTGTTCACATTTTAGAGCTCGTCTAGCCTCATTCGTGGAAGCCGCCATGGCTGCAAAACTTGTGGTGGTGGGAGAAGCTCTTGTTTCCTTGTCAATAAGTCCCGCAACTTCACAAATGCCATTCTTTGAAAGGATCATGGACGCCATAATTCTGGTTGATCTTCTTATTCCCCTCATCCGGCTGTTTTACCTTCTCCTGGAAATCAAAATTATCCGCCAACTGAAACATCCAAACACTGTGAAGTGTTATGGAAATGAAATTCTAGCAGAATCTGTGGGCAAGCACTTAGAGTTGGGAACTCCATGTTATGTAGCCCCAGAGGTTCTGCCAAAAATAGAATATAAGAGATCGCTTGAAGCTTCTGCTGCTGATATATGGAGTTTGGGCTGTGTAATCATTAAAATGTTCTCAGGGAAGCACCCTTGGCCTGGTTTTGAGCCGGTGCAGGCCTTCTATAAAGTTTGTGTTGAACAGCAACATCCGCCCATACCGGAAGGGTTATGCGAAGAGGGTAAAGGTTTTGTGGAACTCTGCTTCACAAGAACTCCGGCCGAGCGGCCATCTGCTGCAGCATTACCAGACCATTCCTTTGTAAGAGCACAAACAACTTAG 750 0.4547 MFAQKKNDSSQKLSHSEATIAVAYGKNDMAEKLEDVTDRKSTVRGNCSHFRARLASFVEAAMAAKLVVVGEALVSLSISPATSQMPFFERIMDAIILVDLLIPLIRLFYLLLEIKIIRQLKHPNTVKCYGNEILAESVGKHLELGTPCYVAPEVLPKIEYKRSLEASAADIWSLGCVIIKMFSGKHPWPGFEPVQAFYKVCVEQQHPPIPEGLCEEGKGFVELCFTRTPAERPSAAALPDHSFVRAQTT 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4271g00050 249 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 145 247 - -
Pral4271g00050 249 ProSiteProfiles Protein kinase domain profile. 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00050 249 Gene3D Transferase(Phosphotransferase) domain 1 116 248 - -
Pral4271g00050 249 SUPERFAMILY Protein kinase-like (PK-like) 108 245 IPR011009 -
Pral4271g00050 249 SMART serkin_6 36 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00050 249 Pfam Protein kinase domain 142 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4271g00050 Pral-Chr4271 334941 337528 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4271g00050 104 245 MAP Kinase Kinase Kinase AT5G66850 42.208 2.25e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral4271g00050 Pkinase 8.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4271g00050 - - pcin:129285400 118.242