Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4271g00046 ATGGTAGTCAATCATGATGCAGACATGGCCCAGAAGCTAGAAGATGCAACTGATAGATCTGAATCGATTTTGGGTTTGAGAAAGAGTACTGTACGGGGAAATTGTCCACATCTCAGAGCTCGTGTAGCCTCACTCATGGAAGCCGGCACGGCTGCAAAACTTGTGGTGGTGGGAGGAGCTCTTGTTTCCGTGATGGCGGTGCTTTTACGGGGCACAATAATAAGGCTTCAATTTCGTCTCTACGTTGACGCCTCCCACTGGTTTGTCTCAATAAAGCTTTTCGCTGTTTTCCAGTTGTCAATAAGTCCCCCAACTTCACAAATGCCATTCTTTGAAAGGATCATGAACGCCATAATTCTGGTTGAACTTCTTATTCGTCTCGTCCGACTGCTTTACCTTCTCCTGCCACCTCTGTTTCTCTACTTCTTCCCAGGAAAGGAGGTCACCCAGGAAGAGGGAATCAAAATTCTCAGTCAATTGGAAAATCCAAACACTGTGAAGTGTTATGGAAATGAAATTGTTGGACGCTACATTTCTCTATACATCCAACTAGGTTCACTGAAGAAATATATCTTGGAACTAGGCGTTTTACATGGACCTTTAATTCGACATTTCACTGAACAAATTCTCTCTGGGTTGGATTGCCTGTATAATAAAAGAGTTGTTCATAGGGACATAAAGCCAGACAATCTACTTGTTTATTCTAACAACATAGTAAAGCTGATTAGCTTTGGTTTGGCCAAGCATCTAGCAGAATCCGTGGGCAAGCACTCAAAGTCAGGAACTCCATATTATGCAGCCCTAGAGGTGCAGGCCTTCTATAAAGTTTGTGTTGAACAGCAACATCCGCCCATACCAGAAGGGTTATGCCAAGAGGGTAAAGATTTTCTGGAACTCTGCTTCACAAGAACTCCGGCTATCTGCTGCAGCATTACTAGACCATTCCTTTGTAAGAGCACAAACAACTAA 969 0.4345 MVVNHDADMAQKLEDATDRSESILGLRKSTVRGNCPHLRARVASLMEAGTAAKLVVVGGALVSVMAVLLRGTIIRLQFRLYVDASHWFVSIKLFAVFQLSISPPTSQMPFFERIMNAIILVELLIRLVRLLYLLLPPLFLYFFPGKEVTQEEGIKILSQLENPNTVKCYGNEIVGRYISLYIQLGSLKKYILELGVLHGPLIRHFTEQILSGLDCLYNKRVVHRDIKPDNLLVYSNNIVKLISFGLAKHLAESVGKHSKSGTPYYAALEVQAFYKVCVEQQHPPIPEGLCQEGKDFLELCFTRTPAICCSITRPFLCKSTNN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4271g00046 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Pral4271g00046 322 SUPERFAMILY Protein kinase-like (PK-like) 154 307 IPR011009 -
Pral4271g00046 322 Pfam Protein kinase domain 154 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00046 322 Gene3D Transferase(Phosphotransferase) domain 1 144 314 - -
Pral4271g00046 322 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 271 306 - -
Pral4271g00046 322 ProSiteProfiles Protein kinase domain profile. 62 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00046 322 SMART serkin_6 118 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4271g00046 Pral-Chr4271 292446 295295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4271g00046 151 306 MAP Kinase Kinase Kinase AT5G66850 37.129 4.12e-31 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral4271g00046 Pkinase 2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4271g00046 - - atr:18438303 130.954