Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4271g00045 ATGGTAGTCAATCATGATGCAGACATGGCCCAGAAGCTAGAAGATGCAACTGATAGATCTGAATCGATTTTGGGTTTGAGAAAGAGTACTGTACGGGGAAATTGTCCACATCTCAGAGCTCGTGTAGCCTCACTCATGGAAGCCGGCACGGCTGCAAAACTTGTGGTGGTGGGAGGAGCTCTTGTTTCCGTGATGGCGGTGCTTTTACGGGGCACAATAATAAGGCTTCAATTTCGTCTCTACGTTGACGCCTCCCACTGGTTTGTCTCAATAAAGCTTTTCGCTGTTTTCCAGTTGTCAATAAGTCCCCCAACTTCACAAATGCCATTCTTTGAAAGGATCATGAACGCCATAATTCTGGTTGAACTTCTTATTCGTCTCGTCCGACTGCTTTACCTTCTCCTGCCACCTCTGTTTCTCTACTTCTTCCCAGGAAAGGAGGTCACCCAGGAAGAGGGAATCAAAATTCTCAGTCAATTGGAAAATCCAAACACTGTGAAGTGTTATGGAAATGAAATTGTTGGACGCTACATTTCTCTATACATCCAACTAGGTTCACTGAAGAAATATATCTTGGAACTAGGCGTTTTACATGGACCTTTAATTCGACATTTCACTGAACAAATTCTCTCTGGGTTGGATTGCCTGTATAATAAAAGAGTTGTTCATAGGGACATAAAGCCAGACAATCTACTTGTTTATTCTAACAACATAGTAAAGCTGATTAGCTTTGGTTTGGCCAAGCATCTAGCAGAATCCGTGGGCAAGCACTCAAAGTCAGGAACTCCATATTATGCAGCCCTAGAGGTTCTTCGAAAAATAGAATATAAGAGCTCGCGTGAAGCTTCTGCTGCTGATATATGGAGTTTGGGTTGTGTAATCATTAAAATGTTCTCAGGGAAGCGTCCTTGGCCTGGTTTTGAGCCGGTGCAGGCCTTCTATAAAGTTTGTGTTGAACAGCAACATCCGCCCATACCAGAAGGGTTATGCCAAGAGGGTAAAGATTTTCTGGAACTCTGCTTCACAAGAACTCCGGCTATCTGCTGCAGCATTACTAGACCATTCCTTTGTAAGAGCACAAACAACTAA 1089 0.4343 MVVNHDADMAQKLEDATDRSESILGLRKSTVRGNCPHLRARVASLMEAGTAAKLVVVGGALVSVMAVLLRGTIIRLQFRLYVDASHWFVSIKLFAVFQLSISPPTSQMPFFERIMNAIILVELLIRLVRLLYLLLPPLFLYFFPGKEVTQEEGIKILSQLENPNTVKCYGNEIVGRYISLYIQLGSLKKYILELGVLHGPLIRHFTEQILSGLDCLYNKRVVHRDIKPDNLLVYSNNIVKLISFGLAKHLAESVGKHSKSGTPYYAALEVLRKIEYKSSREASAADIWSLGCVIIKMFSGKRPWPGFEPVQAFYKVCVEQQHPPIPEGLCQEGKDFLELCFTRTPAICCSITRPFLCKSTNN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4271g00045 362 SUPERFAMILY Protein kinase-like (PK-like) 154 347 IPR011009 -
Pral4271g00045 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Pral4271g00045 362 Gene3D Transferase(Phosphotransferase) domain 1 145 361 - -
Pral4271g00045 362 ProSiteProfiles Protein kinase domain profile. 62 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00045 362 SMART serkin_6 118 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00045 362 Pfam Protein kinase domain 154 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4271g00045 362 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 151 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4271g00045 Pral-Chr4271 292446 295295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4271g00045 151 346 MAP Kinase Kinase Kinase AT5G66850 47.525 7.40e-52 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral4271g00045 Pkinase 1.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4271g00045 - - pcin:129285400 202.601