Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4271g00039 ATGTCTGATGAGCTTAAGGAACTATACGACCAAGGCCGATCCACCATGTATTCATCATCCTCCTATGATTCGCAAGCTTTCGATCCTTCCTCTTACATGAGCTTAACTGAGTGTCTGCAAATTGGAGCCATGGACTACAATTCACTTGCAACTTCTTTTGGTCTGTCTGAGGTATTGATTCCATCATCTGCTGAACAAGAAGGTAAGAACACTCAGAAGCTATCATCAGAAGAGGTAGATTGTGGTACCGCCGGCGCCGGCGCCGAAACTCCACCAATCACCCAGAACTCATCTCTCTCTTCCTTCTCTTCTGAACCTGGGGTTGAAGAAGATTCAAGCAAAAACACTGCGGACGATCATAACCAAGCCAAACCAGAAGAGGAAGCAGAAAGATCTAAGAAAGGAAAGAAAGGAAAGAAGAAAGGAGAGAAGAAAGAGAAGGAACCAAGGTTTGCTTTCATGACCAAGAGTGAAGTTGATCAGCTTGAAGATGGATACCGCTGGAGGAAATATGGCCAGAAAGCTGTAAAAAATAGCCCTTACCCAAGGAGTTACTACAGATGCACGACACAGAAGTGCACAGTGAAGAAACGAGTGGAGAGGTCGTTTGAGGATCCAACAACTGTTATAACAACGTACGAAGGTCAGCACAACCATCCTGTCCCCACTTCTCTGAGAGGAAGTTATAATTCTGCGGCTTTGTTCACACCTTCTTCTTCTTCATCATCATCGTCTTCCTCGCAGTCCCCTTCCATTCTCTCTCATCTCATGTTCCCAAACTTGCCATCGCCTCACGACTTGCTTCTTCTCCATGGAAGCTCCAGTATAAATAACAGTCCTCTTTATTACTCTCACAACTATGCTAATAATCCTAATAATTCTGTTCATCATCAGTATCGTCATCTTCATCATCATTATCAGCTTCCAGTTCCTGATCAGCATGACAATGGCCTCCTCCAAGACTTGATCCCTTCTTCTATGTTCTTCAAACAAGAACCTCGAGAATGA 1008 0.4415 MSDELKELYDQGRSTMYSSSSYDSQAFDPSSYMSLTECLQIGAMDYNSLATSFGLSEVLIPSSAEQEGKNTQKLSSEEVDCGTAGAGAETPPITQNSSLSSFSSEPGVEEDSSKNTADDHNQAKPEEEAERSKKGKKGKKKGEKKEKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFEDPTTVITTYEGQHNHPVPTSLRGSYNSAALFTPSSSSSSSSSSQSPSILSHLMFPNLPSPHDLLLLHGSSSINNSPLYYSHNYANNPNNSVHHQYRHLHHHYQLPVPDQHDNGLLQDLIPSSMFFKQEPRE 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4271g00039 335 Gene3D WRKY domain 145 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4271g00039 335 SMART WRKY_cls 162 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4271g00039 335 MobiDBLite consensus disorder prediction 89 110 - -
Pral4271g00039 335 ProSiteProfiles WRKY domain profile. 157 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4271g00039 335 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 90 248 IPR044810 GO:0003700
Pral4271g00039 335 FunFam WRKY transcription factor 57 148 222 - -
Pral4271g00039 335 MobiDBLite consensus disorder prediction 1 26 - -
Pral4271g00039 335 MobiDBLite consensus disorder prediction 64 152 - -
Pral4271g00039 335 Pfam WRKY DNA -binding domain 163 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4271g00039 335 SUPERFAMILY WRKY DNA-binding domain 154 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4271g00039 335 MobiDBLite consensus disorder prediction 12 26 - -
Pral4271g00039 335 MobiDBLite consensus disorder prediction 111 134 - -
Pral4271g00039 335 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4271g00039 Pral-Chr4271 245952 247957 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4271g00039 1 333 WRKY Transcription Factor Family AT4G18170 42.898 6.08e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4271g00039 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4271g00039 - - qsu:111998523 286.574