Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4268g00001 ATGGTCCACCTGCAACCAAATCTGATGCCCATGTGCCCAAAATTCTCATCATCATCTAATTCCTTTCATGCAACTCCTCAAAATCACATTGCTTCTTCAGTTCGTCCCATACACCAATATAATCCACAACCACATCATGATCCGTTGCTGCCAAATGCATCCCTTGAATTTTCATCGCTCTGTAATAGGCAACACTTGGTCAACCAACCTTTGTCTAACTCAGGGACACCAAGTAATGTTCACACTGATAGCCACAAGGGAAAGTCATGGACTGAGGAAGAACACAGGTTATTTCTGATTGGATTGCAAACATATGGGAAGGGAAATTGGAAGAACATTTCTGAAAATGTTGTGAAGACAAGGACTCCAGTTCAGATTGCTAGCCATGCTCAGAAGTTCTTTAATCACCAAATCAACAAGGGGAACAAAAAGAGAAGAAGAAGAAGCATCCATGATATCACCAATCCCGATGTGTTATTTGTTGAACTTCAATACTATAACACGGGTGGCCTTATTAAGACCATGGATTGA 531 0.4105 MVHLQPNLMPMCPKFSSSSNSFHATPQNHIASSVRPIHQYNPQPHHDPLLPNASLEFSSLCNRQHLVNQPLSNSGTPSNVHTDSHKGKSWTEEEHRLFLIGLQTYGKGNWKNISENVVKTRTPVQIASHAQKFFNHQINKGNKKRRRRSIHDITNPDVLFVELQYYNTGGLIKTMD 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4268g00001 176 CDD SANT 89 134 IPR001005 -
Pral4268g00001 176 SMART sant 86 136 IPR001005 -
Pral4268g00001 176 PANTHER TRANSCRIPTION FACTOR KUA1 29 157 - -
Pral4268g00001 176 MobiDBLite consensus disorder prediction 69 88 - -
Pral4268g00001 176 ProSiteProfiles SANT domain profile. 85 141 IPR017884 -
Pral4268g00001 176 Gene3D - 88 138 - -
Pral4268g00001 176 Pfam Myb-like DNA-binding domain 88 132 IPR001005 -
Pral4268g00001 176 NCBIfam myb-like DNA-binding domain, SHAQKYF class 87 137 IPR006447 GO:0003677
Pral4268g00001 176 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 138 IPR017930 -
Pral4268g00001 176 ProSiteProfiles Myb-like domain profile. 82 134 IPR001005 -
Pral4268g00001 176 FunFam transcription factor MYB1R1 88 139 - -
Pral4268g00001 176 SUPERFAMILY Homeodomain-like 86 137 IPR009057 -
Pral4268g00001 176 MobiDBLite consensus disorder prediction 69 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4268g00001 Pral-Chr4268 5201 6851 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4268g00001 Myb_DNA-binding 2.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4268g00001 - - pcin:129285062 135.961