Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4262g00068 ATGTGCCCAAACTTGCAAGCAGTAAGCGTAACAACGTACCACAAGAAGAACAAGGAGATCGAAATGAACTCTCCGCCGATGTGGACGGCGGTTCAGCCACCGTTCACGGTGGCGCAATGGCAGGAGCTTGAACACCAAGCTCTCATCTTTAAGTACCTCAAGGCTGGACTGGCCGTTCCCCTCGACCTCCTTATTCCCATTCGCAGGAGTCTCGATTTGATGCCGCCGCAGCTCGTTCATCACCCGTCTTTGGGTTATTGCTCGTATTACGGGAAGAAGATCGACCCAGAGCCGGGGAGGTGTCGAAGGACGGATGGGAAGAAGTGGAGATGCTCGAGAGATGCGCATCCGGACTCCAAGTACTGTGAACGGCACATGATACGCCGTCGTTACCGTTCAAGAAAGCCTGTGGAATCGCAACAAGCTGCTTCGCAGTCTTCGTCCAATTCGGCATCGGACGTTGTTGCTGCTGGGAGCAGAAGTGGCTCTGGAAGCTTCCAGAGCTTGCCCTTGCACGGAAATGGTGCTCGTGAGGGTTTGAACCTTGGAAATAACGCATCACAGCATCAGCTACAATCTCTTCCCGGTGAGATTAGCAAGAAAGATTACAGGTTTGGACTGAATTCTGAAGTAGACGAGCACAACTTCTTACAGAAAGGACTGGGAAGCACGAGTTATCTGGGTTTTGACTCTGCCTCGGACACCATGTGGCCTCATATCTCACGAGTTCCCTCAGATCTTGTCTCTGAGTCGAGAAATAGTTCTACTATTGTTAGCAGCTGCTTCCAGTTGGGGACCGGGCGGGATCCTGAGCCACTGAACATAAATGCTGCAAGATCAAAGCAAGATTTCTATGGTGATCAGCTTAGCTTGGCTGGGTGTTTGAAACAGGAATATCAGTCCCCACAGACGTTTTCAACCGACTGGCTCTGGAAGAACTCGAGCTCCCCATCTGTTGAGTATAGGCCCAATAAAGATTCTAGCTGTAACCCTGATGGCATGAATCCCTTTCAGTGA 1017 0.5093 MCPNLQAVSVTTYHKKNKEIEMNSPPMWTAVQPPFTVAQWQELEHQALIFKYLKAGLAVPLDLLIPIRRSLDLMPPQLVHHPSLGYCSYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRYRSRKPVESQQAASQSSSNSASDVVAAGSRSGSGSFQSLPLHGNGAREGLNLGNNASQHQLQSLPGEISKKDYRFGLNSEVDEHNFLQKGLGSTSYLGFDSASDTMWPHISRVPSDLVSESRNSSTIVSSCFQLGTGRDPEPLNINAARSKQDFYGDQLSLAGCLKQEYQSPQTFSTDWLWKNSSSPSVEYRPNKDSSCNPDGMNPFQ 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4262g00068 338 MobiDBLite consensus disorder prediction 132 183 - -
Pral4262g00068 338 PANTHER GROWTH-REGULATING FACTOR 5 21 318 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pral4262g00068 338 MobiDBLite consensus disorder prediction 137 170 - -
Pral4262g00068 338 SMART QLQ_2 33 69 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral4262g00068 338 Pfam WRC 96 138 IPR014977 -
Pral4262g00068 338 MobiDBLite consensus disorder prediction 314 338 - -
Pral4262g00068 338 ProSiteProfiles WRC domain profile. 95 139 IPR014977 -
Pral4262g00068 338 Pfam QLQ 34 68 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral4262g00068 338 ProSiteProfiles QLQ domain profile. 34 69 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4262g00068 Pral-Chr4262 363422 366806 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4262g00068 29 141 GRF Transcription Factor Family AT3G13960 59.829 1.03e-41 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pral4262g00068 WRC 1.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4262g00068 - - pcin:129310568 579.326