Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4262g00056 ATGGACAGGGATTATGAAGGAGGAGGGAATTTTGGGTTTGAAAATGCTGTGGTGATGACAAGAGATCCCAAGCCAAGGCTCAGATGGACGGCTGATCTTCATGATCGATTTGTCGATGCCGTCACCAAGCTTGGTGGCCCCGACAAAGCGACTCCCAAGTCTGTGTTGAGGCTGATGGGCTTGAAAGGCTTGACTTTGTATCATTTGAAGAGCCATTTACAGAAATATAGACTTGGACAGCAGGCCCGGAAGCAAAACAGTGAAGAACAACACAAAGAGAACAATAGTGGAGGTGCATATGTAAATTTTAGTGATCGTTCTTCGGGACCTAGCACCAATTACAGAGGCAATACCCAAACAGAGGAAATCCCATTAGAAGAGGCACTGAGGCGTGGGGTCGAAGTCCAAAAGCAATTGGAAGAGCAGCTTGAGGTACAGAAGAAACTGCAGATGAGAATAGAGGCTCAAGGGAAGTATTTACAAGCCATGCTTGAGAAAGCACAGAAGAGCCTTTCCCTGGACATGAATGGACCAAACAACCTAGAAGCAGCAAGAGTTCAATTGACAGACTTCAACTCTGCTTTGTCCAATTTCATGGAGAATATGAAGAGAGACAACAAAGAAAACATCATGGACATGAATGATTTCTACAAGAAGGCCCACAGTTCATCGGCTTTCGGAATTTACCAGGAAGCCGAGGGAGAAGAACACAAGGATCAAAAGCCTAAGGTTGCAGAGGGTTCAATACAGTTTGACTTAAACATCAAAGGCAGCTATGACTTTGTATCAGGTGCAGCTGAAATGGATTCCAAGATGCTTTCATACAGATTGTAA 834 0.4448 MDRDYEGGGNFGFENAVVMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNSEEQHKENNSGGAYVNFSDRSSGPSTNYRGNTQTEEIPLEEALRRGVEVQKQLEEQLEVQKKLQMRIEAQGKYLQAMLEKAQKSLSLDMNGPNNLEAARVQLTDFNSALSNFMENMKRDNKENIMDMNDFYKKAHSSSAFGIYQEAEGEEHKDQKPKVAEGSIQFDLNIKGSYDFVSGAAEMDSKMLSYRL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4262g00056 277 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 220 IPR044848 GO:0003700
Pral4262g00056 277 MobiDBLite consensus disorder prediction 78 117 - -
Pral4262g00056 277 Gene3D - 23 81 - -
Pral4262g00056 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 81 IPR017930 -
Pral4262g00056 277 FunFam Myb family transcription factor 23 81 - -
Pral4262g00056 277 Pfam MYB-CC type transfactor, LHEQLE motif 124 170 IPR025756 -
Pral4262g00056 277 Pfam Myb-like DNA-binding domain 27 77 IPR001005 -
Pral4262g00056 277 SUPERFAMILY Homeodomain-like 24 81 IPR009057 -
Pral4262g00056 277 Coils Coil 136 156 - -
Pral4262g00056 277 NCBIfam myb-like DNA-binding domain, SHAQKYF class 24 79 IPR006447 GO:0003677
Pral4262g00056 277 MobiDBLite consensus disorder prediction 92 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4262g00056 Pral-Chr4262 314190 317111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4262g00056 4 191 G2-like Transcription Factor Family AT4G13640 52.356 8.11e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4262g00056 Myb_DNA-binding 2.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4262g00056 - - gmx:100819756 358.992