Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4262g00042 ATGGCAGCTTGCACAGTGTACACAACAACAAAGTCTCTCAACACAAAATGCTCCATTTCATCTCCATCAAAATCACATTGGGGTTATTTTGCCCAGAAACAGCGGCTAGTTATCTTCAGGACAAGAAGAAGAAGCAGCCTATGTGTGATAACATGCGGTGCAGTTGCAGGTGATCATGATCAGACGGTAGTGATTGGTCTTGCTGCAGATTCAGGCTGTGGCAAGAGCACATTCATGAGAAGACTAACCAGTGTGTTTGGAGGAGCAGCAGAACCACCAAAAGGAGGGAATCCAGATTCCAACACTCTCATTAGCGACACCACAACAGTTATTTGCTTAGATGATTATCATTCATTGGACAGAAATGGAAGAAAAGAGAAAGGAGTCACAGCACTTGATCCCAGAGCCAACAATTTTGATCTTATGTGTGAACAAGTTAGGGCACTTAAGGATAGAATTGCTGTGGAGAAACCCATTTATAATCATGTCACTGGTCTCTTGGATCCTCCTGAGCTCATCAAGCCTCCCAAAATCTTGGTCATTGAAGGTTTGCATCCAATGTTTGATCCTCGGGTGAGAGAACTGCTGGACTTCAGTATCTACTTGGACATCAGCAATGAAGTGAAATTTGCATGGAAAATTCAGAGAGACATGGCAGAGCGTGGGCACAGTCTTGAAAGCATCAAGGCTAGCATTGAAGCTCGGAAGCCTGATTTTGAAGCCTTTATTGATCCTCAGAAGCAATATGCAGATGCCGTGATAGAAGTGCTGCCAACCCAGCTCATTCCAGATGATAATGAAGGGAAGATTTTAAGAGTGAGGTTAATACAGAAAGAAGGGGTTAAGCATTTTAGCCCTGCTTACTTGTTTGATGAAGGCTCTACCATTTCCTGGATACCATGTGGGAGGAAGCTAACTTGCTCTTATCCTGGTAGTAAATTCTTCTATGGACCAGAGACTTACTATGGTCACGAGGTATCAGTTGTGGAGATGGATGGGCAATTTGACAAACTAGATGAACTGATTTATGTTGAGAGCCATCTCAGTAACCTCTCAACAAAATTCTATGGAGAGGTCACACAGCAGATGTTGCAACATGCTGATTTCCCAGGAAGCAACAATGGGACAGGTCTTTTCCAGACAATAATTGGTTTGAAGATTAGAGATTTATATGAGCAAATAATAGCCAGCAGGGCTAGGACTCCAGTAGGAGCAGCACAGGCCTAG 1227 0.4344 MAACTVYTTTKSLNTKCSISSPSKSHWGYFAQKQRLVIFRTRRRSSLCVITCGAVAGDHDQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRNGRKEKGVTALDPRANNFDLMCEQVRALKDRIAVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDPRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAFIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKHFSPAYLFDEGSTISWIPCGRKLTCSYPGSKFFYGPETYYGHEVSVVEMDGQFDKLDELIYVESHLSNLSTKFYGEVTQQMLQHADFPGSNNGTGLFQTIIGLKIRDLYEQIIASRARTPVGAAQA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4262g00042 408 PANTHER URIDINE KINASE 59 304 - -
Pral4262g00042 408 Pfam Phosphoribulokinase / Uridine kinase family 64 262 IPR006083 GO:0005524|GO:0016301
Pral4262g00042 408 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 333 IPR027417 -
Pral4262g00042 408 Gene3D - 59 292 IPR027417 -
Pral4262g00042 408 CDD PRK 64 353 - -
Pral4262g00042 408 PRINTS Phosphoribulokinase family signature 178 196 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pral4262g00042 408 PRINTS Phosphoribulokinase family signature 231 254 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pral4262g00042 408 PRINTS Phosphoribulokinase family signature 69 86 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pral4262g00042 408 PRINTS Phosphoribulokinase family signature 213 230 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pral4262g00042 408 ProSitePatterns Phosphoribulokinase signature. 213 226 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pral4262g00042 408 FunFam Phosphoribulokinase 59 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4262g00042 Pral-Chr4262 234072 236883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4262g00042 58 254 PRT Gene Family AT1G55810 27.451 7.56e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4262g00042 K00855 - gmx:100777515 704.131