Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4262g00029 ATGGGTTACGAAAACGATCCGTATCGGGATGAGGATGGAGAACCATTGATGTATGATGACGCGCAATCCGATCGCGAGCTCTCTCCTGAACCCCAACAGCAAGGACTATTCGACGATTTGGAGGAAGACGTCGATGATTGGCGCGGCCGAGAACGATCGCAGACTCCGGTATACGATAATGATTCGTCCATGTCAAAGGCGAAGCCTAGGAAGAGGCTTATCAAGAAAGGTGACACTGGGAGCCAGTCTGTGGCTCCGGAGCTTGTTGATGAGGATGAAGAAGCGGATAGTAGTATTCCGGCAAGTTTTATGAGGGACGGGTCTGAGGAGGGGGAAGGAAGAAAGAGGAAGGGGAAGGATGGGGGCAGTGGGAAGAAGGAGAAGAGGTACAAGGGGGAGAAGAGATTAGGTAGTAGCGGCAAAGGCGGCTCAAAACCTGGGTTACCGAAGAAAGGGTTTGCGGTTAAGGCAGGAAAGGATCATGATGGCGATGTCAAAGAGATGTGGGATACAATTGCTCGTGGGGACTCTGAGGATGATCAGGAGGGCGTCAGGACAGTCGATGATGATAATTTCATAGATGACACTGGAGTGGAACCTGCTTTTTATGGCAGTGATAATGAAGCTGGTTCTCCTAGTAGATATGCCCAGGCAGAGGAAGGTGAGGAGGATGATGAGATCAAGGAACTTTTCAAGATGGGGAAGAAGAAGAAGAAGAATGAGAGAAGTCCTGCAGAGATAGCTTTGCTAGTTGAGAATGTCATGGCTGAACTTGAGGTTACAGCTGAAGAGGATGCTGAACTCAATAGACAGGGGAAGCCTGCCATAAATAAGCTGAAAAAGTTGCCTCTTTTAACTGAAGTTCTCTCAAAGAAACAACTTCAACAGGAGTTTTTAGATCATGGAGTGCTGACTTTATTGAAGAATTGGCTTGAACCCCTCCCAGACGGAAGCTTGCCAAACATAAACATCCGCACAGCAATTTTGAACATTTTGAATGATTTTCCTATAGACCTTGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTTGGAAAGGTCATTATGTTTTTATCAAAATCTGATGAAGAAATCGGTGTAAATAGGAAGCTAGCTAAGGAGCTGGTTGATAAATGGAGTCGACCTATATTTAACAAGAGTACAAGATTCGAAGACATGAGGAATGTGGATGATGACAGGATTCCTTTTAGAAGGCCATCGGTGAAGAAGCCTGCAAATAAAGCTTCAGGAATCGAATCTAGAGATGGTGATCTTGATTTGGAATTTTCACAGCGGAAGTCTGGACAATCATCTACCAGACAACTCACAACTAGGCCAGAGGCAACACCATTGGATTTTGTGGTTCGTCCCCCATCTAAAGTTGACCCAGAAGAAGTTAGGGCCCGTGCAAAACAAGCTGCACAGGATCAGCACCGTATGAAGATGAATAAGAAGCTACAGCAATTGAGGGCACCCAAAAAGAGGCAGCTTCAAGCCACTAAGTTGAGTGTTGAAGGTCGGGGTATGATGAAGTATTTGTAA 1548 0.458 MGYENDPYRDEDGEPLMYDDAQSDRELSPEPQQQGLFDDLEEDVDDWRGRERSQTPVYDNDSSMSKAKPRKRLIKKGDTGSQSVAPELVDEDEEADSSIPASFMRDGSEEGEGRKRKGKDGGSGKKEKRYKGEKRLGSSGKGGSKPGLPKKGFAVKAGKDHDGDVKEMWDTIARGDSEDDQEGVRTVDDDNFIDDTGVEPAFYGSDNEAGSPSRYAQAEEGEEDDEIKELFKMGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLPLLTEVLSKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILNILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEIGVNRKLAKELVDKWSRPIFNKSTRFEDMRNVDDDRIPFRRPSVKKPANKASGIESRDGDLDLEFSQRKSGQSSTRQLTTRPEATPLDFVVRPPSKVDPEEVRARAKQAAQDQHRMKMNKKLQQLRAPKKRQLQATKLSVEGRGMMKYL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4262g00029 515 MobiDBLite consensus disorder prediction 1 26 - -
Pral4262g00029 515 Pfam TFIIS helical bundle-like domain 331 385 IPR017923 -
Pral4262g00029 515 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 244 391 IPR035441 -
Pral4262g00029 515 MobiDBLite consensus disorder prediction 107 138 - -
Pral4262g00029 515 MobiDBLite consensus disorder prediction 1 225 - -
Pral4262g00029 515 MobiDBLite consensus disorder prediction 404 426 - -
Pral4262g00029 515 ProSiteProfiles TFIIS N-terminal domain profile. 305 388 IPR017923 -
Pral4262g00029 515 Coils Coil 251 271 - -
Pral4262g00029 515 MobiDBLite consensus disorder prediction 154 192 - -
Pral4262g00029 515 PANTHER PROTEIN IWS1 HOMOLOG 1 1 515 IPR044204 GO:0009742|GO:0032784
Pral4262g00029 515 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 298 388 IPR035441 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pral4262g00029 Med26 9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4262g00029 K17498 - qsa:O6P43_033371 778.859