Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4262g00028 ATGGGTAGTAGTGAGATGAATAAAAGTTCAGAAGAGAAGGAGCCTAAGACACCTCCTGCTACTTCACAGGAGCAGCCTTCAACTACCAGCGCTGGAACAATAAATCCTGACTGGTCTAGCTTTCAGGCATATCCTCCTATGCCTCCGCATGGATACTTGGCATCAAGTCCCCATGCCCATCCGTATGTGTGGGGTGCCCAGCATATTATGCCTCCCTATGGTACTCCACCACATCCCTATGTTGCAATGTATCCCCCCGGCGGAATATGTGCCCGTCCATCAATACCTCCGGGATCTTATCCTTTCAGTCCATTTGCCATGCCTGCTTCTAATGGTATTGCTGAAGCTGAAAATATACCCGCCAGCATGGGAGGTGATGCTAAGATTCCTGAAGTGAAGGGAAAATTGCCAATAAAAAGATCAAAAGGAAATTTGGGCGGTTTGAATGTGACCACTGGGAAGAATAATGAATTAGGTAAAACACCAAGGATGTCTGCTAATGGAAGTCATCCTAAAAGTGGGGAGAGTGCAAGTGAAGATACGAGTGATGAAAGTGATGCAAATTCTCAGGATGACCCTGAGTTCAAATCAGGGGGACGGCAGGATTCTTTGGAAGTTGAAGCATCTCAAAATGCGGTGTATCCTCCTCAAGATGGGGAACATACACATCATCGAGGGATTAATCAACCTATGCCTATCTCTCTTGCTGGTGCTCCTGGAGCAGTTCCTGGTCCCACAACAAACTTAAACATAGGAATGGATTATTGGGGAGCACCAACTTCTTCGGCTACTCCTGTGCTACATGGAAAGGTTCCCTCTACTGCAGTTGGGGAGGGGATGGTCACTGCTGGATCACAGGATGGTGTTCAGTCACAACTTTGGTCACAGGATGAGAGAGAGCTTAAAAGACAGAGGCGGAAGCAATCTAACAGGGAATCTGCTCGCAGATCCAGGTTGCGGAAGCAGGCTGAATGTGAGGAACTAGCCCAGCGAGCTGATTCTCTGAAAGAAGAAAATGCTTCTCTCCGTTCAGAAGTGAGTCGAATCAGGAGTGAGTGTGAGCAGTTGCTCTCGGAGAACGCTGCACTTGAGGAGAGACTGGGGGAATTACATGGCAAAGAAGATCTTGGGTCTAGCCGGAATGATGAAAATGTGAGTGATGAACCTCAACAGACTGGGCAAGGGGAGGATGTGAAGGATGGTCATTAG 1209 0.4789 MGSSEMNKSSEEKEPKTPPATSQEQPSTTSAGTINPDWSSFQAYPPMPPHGYLASSPHAHPYVWGAQHIMPPYGTPPHPYVAMYPPGGICARPSIPPGSYPFSPFAMPASNGIAEAENIPASMGGDAKIPEVKGKLPIKRSKGNLGGLNVTTGKNNELGKTPRMSANGSHPKSGESASEDTSDESDANSQDDPEFKSGGRQDSLEVEASQNAVYPPQDGEHTHHRGINQPMPISLAGAPGAVPGPTTNLNIGMDYWGAPTSSATPVLHGKVPSTAVGEGMVTAGSQDGVQSQLWSQDERELKRQRRKQSNRESARRSRLRKQAECEELAQRADSLKEENASLRSEVSRIRSECEQLLSENAALEERLGELHGKEDLGSSRNDENVSDEPQQTGQGEDVKDGH 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4262g00028 402 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 305 320 IPR004827 GO:0003700|GO:0006355
Pral4262g00028 402 MobiDBLite consensus disorder prediction 1 42 - -
Pral4262g00028 402 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 300 363 IPR004827 GO:0003700|GO:0006355
Pral4262g00028 402 Pfam bZIP transcription factor 298 360 IPR004827 GO:0003700|GO:0006355
Pral4262g00028 402 MobiDBLite consensus disorder prediction 134 202 - -
Pral4262g00028 402 MobiDBLite consensus disorder prediction 365 402 - -
Pral4262g00028 402 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 389 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pral4262g00028 402 MobiDBLite consensus disorder prediction 365 382 - -
Pral4262g00028 402 Coils Coil 311 373 - -
Pral4262g00028 402 CDD bZIP_plant_GBF1 303 353 IPR045314 GO:0003700|GO:0006355
Pral4262g00028 402 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Pral4262g00028 402 SMART brlzneu 298 362 IPR004827 GO:0003700|GO:0006355
Pral4262g00028 402 Gene3D - 301 355 - -
Pral4262g00028 402 MobiDBLite consensus disorder prediction 19 40 - -
Pral4262g00028 402 MobiDBLite consensus disorder prediction 145 175 - -
Pral4262g00028 402 Pfam Disordered region downstream of MFMR 135 265 - -
Pral4262g00028 402 SUPERFAMILY Leucine zipper domain 301 357 IPR046347 GO:0003700|GO:0006355
Pral4262g00028 402 MobiDBLite consensus disorder prediction 330 349 - -
Pral4262g00028 402 MobiDBLite consensus disorder prediction 214 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4262g00028 Pral-Chr4262 163012 167756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4262g00028 1 402 bZIP Transcription Factor Family AT2G35530 57.971 2.68e-143 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4262g00028 MFMR_assoc 9.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4262g00028 K09060 - vvi:100243644 554.288