Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4262g00027 ATGGGTAGCAGTAAGATGGATAAAACTTCAAATGACAAGGAGCCTAAGACTCCTGCTGCTACGGCACAGGAGCAGCCTTCAACCACCAGCACTGGAGCAGTAAATCCTGACTGGCCTAGTTTTCAGACATATTCTCCTATACCTCCACATGGATACTTGGCATCAAGTCCGCAAGCACATCCATATATGTGGGGCGTCCAGCCTATTATGCCTCCCTATGGTACTCCACCGCATCCTTATGTTGCAATGTATCCCCCTGGCGGCATATATGCTCATCCATCAATGCCTCCGGGATCTTATCCTTTCAGTCCATTTGCCATGCCTACTTCTAATGGTATTGCTGAGGCTTCAGGAAACACGCCTGGCAGCATGGAGGGTGATGCTAAGCCTCCTGAGATGAAGGAAAAATTGCCAGTAAAAAGATCAAAAGGAAGTTTGGGCAATTTGAATATGATCACGGGGAAGAATAATGAAATTAGTAAAAACCCAGGGACGTCTGCTAATGGAATTCATTCAAAAAGTGGTGAGAGTGCAAGTGAAGATACAAGTGAAGGAAGTGATGCAAATTCTCAAGATGACTCTGAGTTCAAATCAGGAGGCAGGCATAATTCCTCGGAAGCTGAACCACTTCAAAATGGAAGTTCAGTGCATGCTCCTCAAAATGGGGGAGTTAATACACATCATAAGGTGGTTAATCAAGCTATGCCTATATCTGCCCCCGGTGCTCCTATAGCTGGTCCCACGACAAACCTGAATATTGGAATGGATTATTGGGGAGCACCAACTTCTGCTGCAATTCCTGCACTGCACGGAAAGGTTCCTTCTGGTGCAGTTGCTGGGGGAATGGTTACTGCTGGATCCCGGGATAATGTTCAGTCACAACTTTGGCTTCAGGATGAAAGAGAGCTTAAAAGACAAAGACGGAAGCAATCTAATAGAGAATCAGCTCGCAGATCCAGGTTACGCAAGCAGGCAGAGTGTGATGAGCTAGCGCAGCGTGCTGAGGCCTTGAAAGAAGAAAACGCTTCTCTCCGGTCAGAAGTGAGTCGAATTAAGAGCGAGTACGAACGGTTGCTCTCAGAAAATGCTGTACTCAAGGAGAGAATGGGGGAACTTCCTGAGAAAGAAGATTTTAGGCCAGGCCAGAATGATGAAAATGCCAGTAACGAAGCTCAGCAGACGGGGGAGGCTGTGAAAGGTGATCAGTAG 1209 0.469 MGSSKMDKTSNDKEPKTPAATAQEQPSTTSTGAVNPDWPSFQTYSPIPPHGYLASSPQAHPYMWGVQPIMPPYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPFAMPTSNGIAEASGNTPGSMEGDAKPPEMKEKLPVKRSKGSLGNLNMITGKNNEISKNPGTSANGIHSKSGESASEDTSEGSDANSQDDSEFKSGGRHNSSEAEPLQNGSSVHAPQNGGVNTHHKVVNQAMPISAPGAPIAGPTTNLNIGMDYWGAPTSAAIPALHGKVPSGAVAGGMVTAGSRDNVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIKSEYERLLSENAVLKERMGELPEKEDFRPGQNDENASNEAQQTGEAVKGDQ 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4262g00027 402 PANTHER G-BOX-BINDING FACTOR 3-RELATED 13 391 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pral4262g00027 402 MobiDBLite consensus disorder prediction 301 326 - -
Pral4262g00027 402 MobiDBLite consensus disorder prediction 362 402 - -
Pral4262g00027 402 Pfam bZIP transcription factor 300 362 IPR004827 GO:0003700|GO:0006355
Pral4262g00027 402 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 307 322 IPR004827 GO:0003700|GO:0006355
Pral4262g00027 402 MobiDBLite consensus disorder prediction 114 226 - -
Pral4262g00027 402 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 302 365 IPR004827 GO:0003700|GO:0006355
Pral4262g00027 402 MobiDBLite consensus disorder prediction 1 46 - -
Pral4262g00027 402 MobiDBLite consensus disorder prediction 146 185 - -
Pral4262g00027 402 Gene3D - 303 375 - -
Pral4262g00027 402 Coils Coil 320 368 - -
Pral4262g00027 402 MobiDBLite consensus disorder prediction 15 41 - -
Pral4262g00027 402 SMART brlzneu 300 364 IPR004827 GO:0003700|GO:0006355
Pral4262g00027 402 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Pral4262g00027 402 Pfam Disordered region downstream of MFMR 135 267 - -
Pral4262g00027 402 MobiDBLite consensus disorder prediction 204 226 - -
Pral4262g00027 402 CDD bZIP_plant_GBF1 305 355 IPR045314 GO:0003700|GO:0006355
Pral4262g00027 402 MobiDBLite consensus disorder prediction 362 383 - -
Pral4262g00027 402 SUPERFAMILY Leucine zipper domain 303 359 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4262g00027 Pral-Chr4262 155240 160630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4262g00027 1 397 bZIP Transcription Factor Family AT2G35530 60.688 1.67e-162 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4262g00027 MFMR_assoc 2.6e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4262g00027 K09060 - gmx:100101882 620.928