Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4262g00026 ATGGAGGAAGAAGCAGAGCAAGAAAAAGAAGCTCTCCGCCTTAAAGCCATCGCTGAATCCAAATACAAGAGTTCCAACCTCAGCTCTGCTTTGAAACATGCCAAGCGAGCCCAACGCCTTGTTCCTGACCTCGATGGTATTTCCGAAATGGTCACTTCCTTAGACATCCTCAGTGTGGCCTCCAAATCGTCCACTCCAGACTGGTACGAGATACTCCAGGTCGAGCCCTTTGCTCACTCCAACGTCATTCGGAAGCAGTACAAGAAGCTAGCTTTGATTCTTCACCCGGACAAGAATCCCCATGCGGCTTCCGAGGAGGCGTTCAAGCTCGTTAATGAGGCGTTCCGATTTCTTTCTGATAAAATTCGGAGGAAGGAATACGATATGAAGCTGAGGATTCGGATTCAGAATGAGGCGACGAAGGGTTCAAAGCAGCAGTTGGAGACCTTCTGGACAGCGTGCTGCACTTGTCGGCTTCTGCATCAGTTTGAGAGGAAGTATGTGGGTCATAATTTGGTGTGCCCTAGTTGTAAAAAGAGTTTCAAGGCTGTGGAGGTTGAGAATGGTAAGGAGTCTGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGATGAGGGTTAGGAATAGAAGTAGGAAGTTGAGAGTTGCGAGCTTGAGGAAGAAAGTTGGTACTGTTGGCAAATCACCGACCGTGAAGGGGAAAGCGAGCGGCGAAGAGGTTGAACCTGTGACCAATAAGAGTGGAAGACTAAGGGACAAAGTTGGAGGCGTTGAAGCGAGACATGGGGAATTAGAGAGTGAAGGAGCTGTTGGTGAATGGAGGGGGGGAAGACTGAGAAGTGGAGGCTTGAAGAGGAGAATGAGCACTGTGGGGGATGTGCTGGAAAGGTCCAAAACAAAGAAAATTATAACTCGCGAGGAAACGATGACATTAGCGGAAATGCAGTCTGAAATCAAGAAAAAGGCTCAGCAAAAGAGGAAGATGACATTTAAGCTAAGGGAAAAGGAGGGGGATAGAACAGAGAAGAGGAAAGAGCAGGAGGAATTACGGAAGGCTTTAAAAAGTTCCAGGGGTTCGGTGGCTGTCAAACCAAAAAGTTTGAAGAGCGGGAAGCTAGCAGCTGAGGAGAAGCAAGCATCTCCTGCTAAAAGTAAAGAACTGAAAATCGAGAAGCACAACAACTCTATCGGAGGAGACATGGAAAATATGGCAGTAGAGGATTCAGATTTTTATGATTTTGATAAAGACAGAGTAGAGAGAAGCTTTAAGAAGGGCCAGGTGTGGGCTGTATATGATGACGACGATGGAATGCCGAGGAATTATGCTTTGATTGATGAAGTTGTATCTGTAAATCCTTTTGAAGTAAGAATAAGTTGGCTAGATCTACAAAACAGTGGGGATGAAAAGATAACTAGTTGGGAGAAAAGAGGGTTTCGTGTATCTTGTGGGAGATTTAAAGTTGCCAGGAAGACTTCCATAAATTCTGTAAATATCTTTTCCCATGTTGTAGACTGTGAACAAGCAGCTCGTGAAGCTTACATAATTTATCCAAAGAAGGGGTCTGTGTGGGCACTTTATAATGAGACAGTTCCTGGTATAGAGGGAAGAAGTGTTGCAGTTCCGAGCAAGAGGTGCTATGATATTGTTGTATTTTTGACGAGTTATAATGAGATAACTGGATTAAGCATGGCATATCTGGGGAAAGTCACAGGTTACAAGACGATATTTAAGAGACAAGAAATGGGGAGTCATGCTATTACATATCTTGAAAGAGATGATTTCTGGTCAGTGTCACATCAAATACCTGCACGGAAGCTTTCTGGCACTGAGACTCCTGAACTTTTGAGAGACTCTTGGGAACTTGATCCTGCTTCACTTCCTTCAGATTTACTTGGGCTTAATGGGACTATCAATCTTTGA 1917 0.4497 MEEEAEQEKEALRLKAIAESKYKSSNLSSALKHAKRAQRLVPDLDGISEMVTSLDILSVASKSSTPDWYEILQVEPFAHSNVIRKQYKKLALILHPDKNPHAASEEAFKLVNEAFRFLSDKIRRKEYDMKLRIRIQNEATKGSKQQLETFWTACCTCRLLHQFERKYVGHNLVCPSCKKSFKAVEVENGKESEEEEEEEEEEMRVRNRSRKLRVASLRKKVGTVGKSPTVKGKASGEEVEPVTNKSGRLRDKVGGVEARHGELESEGAVGEWRGGRLRSGGLKRRMSTVGDVLERSKTKKIITREETMTLAEMQSEIKKKAQQKRKMTFKLREKEGDRTEKRKEQEELRKALKSSRGSVAVKPKSLKSGKLAAEEKQASPAKSKELKIEKHNNSIGGDMENMAVEDSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRNYALIDEVVSVNPFEVRISWLDLQNSGDEKITSWEKRGFRVSCGRFKVARKTSINSVNIFSHVVDCEQAAREAYIIYPKKGSVWALYNETVPGIEGRSVAVPSKRCYDIVVFLTSYNEITGLSMAYLGKVTGYKTIFKRQEMGSHAITYLERDDFWSVSHQIPARKLSGTETPELLRDSWELDPASLPSDLLGLNGTINL 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4262g00026 638 MobiDBLite consensus disorder prediction 314 384 - -
Pral4262g00026 638 Gene3D DnaJ domain 56 156 IPR036869 -
Pral4262g00026 638 SUPERFAMILY Chaperone J-domain 62 132 IPR036869 -
Pral4262g00026 638 Pfam DnaJ domain 67 128 IPR001623 -
Pral4262g00026 638 MobiDBLite consensus disorder prediction 186 208 - -
Pral4262g00026 638 Coils Coil 331 351 - -
Pral4262g00026 638 Coils Coil 183 203 - -
Pral4262g00026 638 Pfam Domain of unknown function (DUF3444) 400 609 IPR024593 -
Pral4262g00026 638 CDD DnaJ 67 120 IPR001623 -
Pral4262g00026 638 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pral4262g00026 638 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pral4262g00026 638 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pral4262g00026 638 MobiDBLite consensus disorder prediction 314 353 - -
Pral4262g00026 638 PANTHER BNAC03G44070D PROTEIN 5 626 - -
Pral4262g00026 638 SMART dnaj_3 66 123 IPR001623 -
Pral4262g00026 638 MobiDBLite consensus disorder prediction 224 246 - -
Pral4262g00026 638 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4262g00026 Pral-Chr4262 150445 153183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4262g00026 1 186 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.693 2.56e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4262g00026 - - qsa:O6P43_033368 753.436