Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4262g00011 ATGGAGTTCTTTCCGGCACAACCTGATTTGTCGTTGCAGATTAGTCCTCCAAACTCGAAGCCCACATCAGGATGGAGGAATAGTGGGACACATCAGGATCAGCTTGATTTGGGGTTCTGGAAGAGAGCTTTGGAAACCAGAAGCCCATTGCTTTCATCAGTGCCTAAAACTGACACTAGTAACTTTTTTGACCTTTCACTCTCCAATAATTCCAACCCAGTTCCTACATTAACGCCTTCAATTTCTTCCTCGGATCACCTCGCTCACCAACGCTTCCAAAAAGCTCCGTTTCAACACCAACACCCACCCTTGACACAAGACCTGGGATTTCTCAGACCTATCAGAGGAATCCCGGTGTACCAGAACCTTCCTCATCATCCTCATCCCGGAACTCTTCCTTTCTCTCAAGTTCAGAATCTGGATGCTTCTATTTCAGCTGCAGTTAACAACACGACCACCTGTACAAGCTCCACCACCCCTTTTCCTTTTCATCATCATCATGGTCAAGGTTTGATGAGGTCGAGGTTCTTGTCTCATCGCTTCCCTACCAAGCGCAGCATGAGAGCTCCCAGGATGCGGTGGACTACCACCCTCCATGCTCGCTTTGTTCATGCCGTTGAGCTTTTGGGTGGCCACGAAAGGGCTACACCCAAATCCGTTCTCGAGCTAATGGATGTCAAGGATCTTACTTTAGCCCACGTTAAATCTCATTTACAGATGTATCGGACAGTGAAAACCACAGATAGAGCGGCAGCTTCTTCTACAGGCCAATCGGACGGATATGATAACGGATCATCTGGGGATACTTCGGAGGAATTAACGTTTGACATGAACAATCTGAGAAGATCCGATCTATCTCCCAAGCAGGGAAGACAAAGTGTTCAACAAGAAAAGGAATATCACCGCCTCTGGAGCAACTCTTCCAGAGAAGCTTGGTTGCATGGGAAGCCAAAGGAGATTGATTCTGTTGGGAACAACAATGTTAGTTGTCTTGAGAAAGAGAGAATATCAGATGGGAGCTCATCGTCAAGCATTTCAGGATCAAGTCCTAAGAAGCCTAATCTTGATCTGGAGTTCACTTTGGGACAGCCAATATGA 1098 0.4672 MEFFPAQPDLSLQISPPNSKPTSGWRNSGTHQDQLDLGFWKRALETRSPLLSSVPKTDTSNFFDLSLSNNSNPVPTLTPSISSSDHLAHQRFQKAPFQHQHPPLTQDLGFLRPIRGIPVYQNLPHHPHPGTLPFSQVQNLDASISAAVNNTTTCTSSTTPFPFHHHHGQGLMRSRFLSHRFPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSTGQSDGYDNGSSGDTSEELTFDMNNLRRSDLSPKQGRQSVQQEKEYHRLWSNSSREAWLHGKPKEIDSVGNNNVSCLEKERISDGSSSSSISGSSPKKPNLDLEFTLGQPI 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4262g00011 365 MobiDBLite consensus disorder prediction 11 31 - -
Pral4262g00011 365 MobiDBLite consensus disorder prediction 333 353 - -
Pral4262g00011 365 MobiDBLite consensus disorder prediction 1 31 - -
Pral4262g00011 365 MobiDBLite consensus disorder prediction 247 301 - -
Pral4262g00011 365 MobiDBLite consensus disorder prediction 333 365 - -
Pral4262g00011 365 NCBIfam myb-like DNA-binding domain, SHAQKYF class 190 243 IPR006447 GO:0003677
Pral4262g00011 365 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 364 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pral4262g00011 365 MobiDBLite consensus disorder prediction 247 293 - -
Pral4262g00011 365 FunFam Myb family transcription factor 188 246 - -
Pral4262g00011 365 SUPERFAMILY Homeodomain-like 187 243 IPR009057 -
Pral4262g00011 365 Pfam Myb-like DNA-binding domain 191 242 IPR001005 -
Pral4262g00011 365 Gene3D - 189 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4262g00011 Pral-Chr4262 61105 65534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4262g00011 1 364 G2-like Transcription Factor Family AT4G17695 39.633 1.02e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4262g00011 Myb_DNA-binding 1.7e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4262g00011 - - aprc:113868756 422.165