Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4261g00004 ATGACATTGGTAAGAGAAAGGAGGCATCAGGAAGCTCTGAGGCTTTCCTTACCATCACCTCCAGTTCCCGAACCACATTTCTGCAATCAAACCCAAGTCCCAGCCTCCTGTAGCAACTCTCTGGCCACCAACAACCTTTTGAGCCTCGAGAAACTCACAGTTCTCGGCCATGGCAATGGCGGTACAGTGTATAAAGTCCATCACAAGAAGAACCAAACCTTCTATGCTTTGAAAGTCCTCAGGTTCAACCAGAATGCTCTTGAAATATCTCGGCAGGCTAAACGTGAGGCGGAGATTCTCAGAAGAGTGGATTCCCCATATATTGTGAGGTGCCATGCAGTTTTTGACAATAATTGCAGTGAATCTCATGTAAATGGTGGTGGCGGCGGCATTAGCTTTGTTATGGAATACATGGAAAGGGGTTCATTACATGACGTGTTGAGAGAACACAAAGCACTACCAGAGGAAGTGATATCTGTGTTGACAAAGAGAGTTTTGGAAGGACTCAAGTATTTGCATGGCATGAACATAGTGCACAGAGATATCAAACCTTCAAACTTGCTTGTGAATGACAAAGGGGAGGTGAAGATCGCAGATTTTGGAGTCAGTCATGTGGTAGAAGGAAGGTTTGAGGCATCAGATTGTAATGCAGGCACGTGTGCTTATATGAGCCCAGAAAGAGTTGATCCGGAGAGATGGGGTGGTGAAAATATGGATGGGTTTGCTGGGGATGTGTGGTCAGTAGGAGTTTTGATGTTAGAATGTCTTCTGGGTCATTTCCCTTTTACTGATGCAGGGCAGAAACCAGACTGGGTCACATTGATGTGTGTGATTTGTTCTGGTGAGAAGCTTGAAATGCCAGAGAAGGCATCACCAGAGTGCAAAAGCTTTGTGCAGAGATGTTTAGAGAAGGATTGGAGGAAAAGAGCAACAGTCGGTGAGCTTCTTGATCACCCATTTGTGAGTACCAAGTCTTGCCCTTCTAGCAAAGGATTGCTCAATTATCTTCTGCATTCTTGA 1020 0.452 MTLVRERRHQEALRLSLPSPPVPEPHFCNQTQVPASCSNSLATNNLLSLEKLTVLGHGNGGTVYKVHHKKNQTFYALKVLRFNQNALEISRQAKREAEILRRVDSPYIVRCHAVFDNNCSESHVNGGGGGISFVMEYMERGSLHDVLREHKALPEEVISVLTKRVLEGLKYLHGMNIVHRDIKPSNLLVNDKGEVKIADFGVSHVVEGRFEASDCNAGTCAYMSPERVDPERWGGENMDGFAGDVWSVGVLMLECLLGHFPFTDAGQKPDWVTLMCVICSGEKLEMPEKASPECKSFVQRCLEKDWRKRATVGELLDHPFVSTKSCPSSKGLLNYLLHS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4261g00004 339 FunFam Mitogen-activated protein kinase kinase 1 29 139 - -
Pral4261g00004 339 SUPERFAMILY Protein kinase-like (PK-like) 50 323 IPR011009 -
Pral4261g00004 339 Gene3D Transferase(Phosphotransferase) domain 1 136 334 - -
Pral4261g00004 339 ProSiteProfiles Protein kinase domain profile. 49 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4261g00004 339 SMART serkin_6 49 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4261g00004 339 Pfam Protein kinase domain 50 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4261g00004 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Pral4261g00004 339 Gene3D Phosphorylase Kinase; domain 1 27 135 - -
Pral4261g00004 339 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Pral4261g00004 339 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 32 323 - -
Pral4261g00004 339 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Pral4261g00004 339 PRINTS Tyrosine kinase catalytic domain signature 171 189 IPR001245 GO:0004672|GO:0006468
Pral4261g00004 339 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Pral4261g00004 339 CDD PKc_MAPKK_plant_like 48 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4261g00004 Pral-Chr4261 27605 28740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4261g00004 1 324 MAP Kinase Kinase Gene Family AT1G32320 51.852 1.75e-109 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pral4261g00004 Pkinase 6.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4261g00004 K20604 - gmx:100817973 461.84