Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4261g00003 ATGGACGGAGCAAATAACAGCGGCTCCGGCGGCGGCACGCAGACGCCGGCTCCTGCTCCCATTCCCAATACCAACGCGCCTCCGCCGTTTCTTAGTAAGACATATGACATGGTGGATGACCCGTCCAGTGATGCGATCGTTTCTTGGAGCTCAACCAACAATAGCTTTATTGTTTGGAACCCTCCTGAGTTTGCCCGGGACCTTTTGCCTAAGTACTTCAAGCACAATAACTTCTCCAGCTTTGTTAGGCAGTTGAATACATATGGTTTCAGGAAGGTCGATCCAGATCGGTGGGAATTTGCTAATGAGGGCTTTTTGAGGGGTCAGAAGCACTTGCTTAAGAGTATAACCCGGCGGAAACCTGCCCATGGTCATAGTCCGCAACAGGCACAACAATCTCATGGGCAGAGTTCATCTGTAGGGCCATGTGTAGAGGTTGGGAAGTTTGGTCTAGAGGAAGAGGTTGAAAGGCTCAAAAGAGATAAGAATGTGCTCATGCAGGAGCTTGTGAGGTTGAGACAACAGCAACAGGCCACTGATAACCAGATGCAACAGATGGTTCAGCGCCTTCAGGGCATGGAACAACGTCAGCAGCAAATGATGTCATTCCTTGCAAAGGCTGTCCAGAGCCCTGGCTTCTTGACACAGTTTGTACAACAGCAAAATGAGAGCAATAGACGCATAACTGAAGCCAACAAAAAACGACGCCTTAAGCAGGAGGGTATTCCTGAAACAGAGTGTGCTACTGCTTCTGATGGACAAATTGTTAAGTACCAACCTTTGATGAATGAAGCTGCTAAAGCAATGTTGAGGCAGATCATGAAATTGGATACCCCTTGGCTAGAATCTTTCAATAATAACTCAGACAATTACTTGATCGGCGATGGCTCAACATCATCAGGGGCAATGGACAGTGGGAGCACTTCAAATCGGAGTTGTGGAGTAACCCTTCAAGAGGTCCCCCCAACTTCAGTGAATGCTCCCTCAGCTGGCAAGTCTGAAAAACAGTCTTCTCCACAGTATGGGGCTTCTGAAAAAGTTACGACTGCTCAATACCCCGATGTAAATGTGCTCATTGGTGCATCTGAGAAACTTTCTGTCCCTGTTTCTGAGGTAGATGTCATGCCTGAGCTTTCTTCAATACCAGAGATGGCGACAGGAAGTATTCTTGATATTCCTGAAGAGAATTATATGGGACCTGAAACAGGAGATGAGGGATTCATGGATCCTAACTTACTGGGGGTAAATGGGTCGATGCCCATTGATATTGGTAGTATTTCGCCTGATACTGACATTGATGACTTGTTACGCAACTCTTCTTTTTGGGATGACTTCGTGCAAAGTCCATTGCCGGGGGAGATTGAGATTGATGCTGCTGATGTGTTAAAGGGAAATGAGGCGCAGGCAGTCGAAAATGGATGGGACAAAGCGGAAAATATGGATCAACTTACAGAGCAGATGGGGCTTCTTTCTTCTGACGCAAAAAAAGTTTGA 1494 0.4685 MDGANNSGSGGGTQTPAPAPIPNTNAPPPFLSKTYDMVDDPSSDAIVSWSSTNNSFIVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSITRRKPAHGHSPQQAQQSHGQSSSVGPCVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQATDNQMQQMVQRLQGMEQRQQQMMSFLAKAVQSPGFLTQFVQQQNESNRRITEANKKRRLKQEGIPETECATASDGQIVKYQPLMNEAAKAMLRQIMKLDTPWLESFNNNSDNYLIGDGSTSSGAMDSGSTSNRSCGVTLQEVPPTSVNAPSAGKSEKQSSPQYGASEKVTTAQYPDVNVLIGASEKLSVPVSEVDVMPELSSIPEMATGSILDIPEENYMGPETGDEGFMDPNLLGVNGSMPIDIGSISPDTDIDDLLRNSSFWDDFVQSPLPGEIEIDAADVLKGNEAQAVENGWDKAENMDQLTEQMGLLSSDAKKV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4261g00003 497 MobiDBLite consensus disorder prediction 300 344 - -
Pral4261g00003 497 MobiDBLite consensus disorder prediction 228 248 - -
Pral4261g00003 497 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral4261g00003 497 PRINTS Heat shock factor (HSF) domain signature 68 80 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral4261g00003 497 PRINTS Heat shock factor (HSF) domain signature 30 53 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral4261g00003 497 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 24 322 IPR027725 -
Pral4261g00003 497 SUPERFAMILY "Winged helix" DNA-binding domain 26 119 IPR036390 -
Pral4261g00003 497 MobiDBLite consensus disorder prediction 1 19 - -
Pral4261g00003 497 MobiDBLite consensus disorder prediction 1 31 - -
Pral4261g00003 497 MobiDBLite consensus disorder prediction 228 242 - -
Pral4261g00003 497 Coils Coil 148 196 - -
Pral4261g00003 497 Pfam HSF-type DNA-binding 30 119 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral4261g00003 497 MobiDBLite consensus disorder prediction 118 141 - -
Pral4261g00003 497 SMART hsfneu3 26 119 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral4261g00003 497 MobiDBLite consensus disorder prediction 122 140 - -
Pral4261g00003 497 Gene3D - 23 120 IPR036388 -
Pral4261g00003 497 ProSitePatterns HSF-type DNA-binding domain signature. 69 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral4261g00003 497 FunFam Heat shock transcription factor 1 23 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4261g00003 Pral-Chr4261 19429 25498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4261g00003 2 491 HSF AT1G32330 53.242 3.52e-168 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pral4261g00003 HSF_DNA-bind 5.4e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4261g00003 K09419 - gmx:732544 677.552