Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4260g00070 ATGGGTAGGCCACCGTGTTGTTGTGATGAGAGTGGTGTGAAGAGAGGACCATGGACGCCTGAAGAAGATGAGAAACTTTTTGATTATATCAGTAAACATGGCAGTGGAAATTGGAGAACGGTCCCAAAGCATGCGGGACTCAACAGATGCGGCAAAAGCTGCAGGCTACGGTGGACCAATTATCTTAGGCCTGATATCAAGAGAGGCAAATTTACTGAAGAAGAGAAGCAATTGATCATCAAACTTCATTCTGTTCTTGGAAACAAGTGGTCGAAGATTGCAACGCATCTTCCAGGGAGGACTGACAACGAGATTAAGAACTTCTGGAACACCAATCTGAGGAAGAAGCTTCTCCAGATGGGTATTGATCCAGAAACTCACAAGCCAAGAACTGACTTGAAGCATCTCTTGAACCTCTCGCAGTTGTTAGGAACGGCTAATATTAACTTGATGAGCCCTTGGAGCCATGGGGGTCTAGGTTTCCAGCAACCAGACGTGACTCATCAGTTAGCCCAAATCCAACTTCTGCAGAATCTGTTGCAGCTTATGAACGGCAATTCCTTCAGTAACATGCAGAGCATTCTCCCGATCTTACTGAGTAAGCAAAGTTTGATCAATAACCCAGTGGAAGAAGATATAAATGGTCCAAACAGCACTCTCCCGAACAACAAAGAGTCTTTTTTGAGAGAACAAGAATTACGTGCAATCCCTGATCTATTTCCTCCAGCACTAAGCGACGCAAACAAGGATATTTCAGAATCATGGACGTACCTGGAAGGAGCATCACATCAACAAGCTTTTGATATCAACAGTAGAGTTAGAAGAACTTCTTCGTCACATGAATTGAATCAAGATGAAAATCCATTTCTTGCCACTGATTCAGCCAACCAAATGGAGAGATCCAATACTGATGAAATGGCCGACCTGCAGCCAGCTCCATCCACTGTCTTTGATGCTTGGGAAAATCTACTCCTGGAAGATGATACAAGCGATTCCTACTGGAAAGAACTTCTAGATTTGACAGCCACCACTTCCTCATCGCTGGTTTCATGGTAG 1056 0.4413 MGRPPCCCDESGVKRGPWTPEEDEKLFDYISKHGSGNWRTVPKHAGLNRCGKSCRLRWTNYLRPDIKRGKFTEEEKQLIIKLHSVLGNKWSKIATHLPGRTDNEIKNFWNTNLRKKLLQMGIDPETHKPRTDLKHLLNLSQLLGTANINLMSPWSHGGLGFQQPDVTHQLAQIQLLQNLLQLMNGNSFSNMQSILPILLSKQSLINNPVEEDINGPNSTLPNNKESFLREQELRAIPDLFPPALSDANKDISESWTYLEGASHQQAFDINSRVRRTSSSHELNQDENPFLATDSANQMERSNTDEMADLQPAPSTVFDAWENLLLEDDTSDSYWKELLDLTATTSSSLVSW 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4260g00070 351 Gene3D - 15 67 - -
Pral4260g00070 351 FunFam MYB-related transcription factor 14 67 - -
Pral4260g00070 351 FunFam Transcription factor MYB39 70 131 - -
Pral4260g00070 351 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Pral4260g00070 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Pral4260g00070 351 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Pral4260g00070 351 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Pral4260g00070 351 SMART sant 14 64 IPR001005 -
Pral4260g00070 351 SMART sant 67 115 IPR001005 -
Pral4260g00070 351 PANTHER F14D16.11-RELATED 1 306 - -
Pral4260g00070 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pral4260g00070 351 CDD SANT 70 113 IPR001005 -
Pral4260g00070 351 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pral4260g00070 351 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Pral4260g00070 351 Gene3D - 69 136 - -
Pral4260g00070 351 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4260g00070 Pral-Chr4260 488076 489672 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4260g00070 1 339 MYB Transcription Factor Family AT5G16770 43.966 4.07e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4260g00070 Myb_DNA-binding 3.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4260g00070 K09422 - gmx:778082 348.206