Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4260g00069 ATGGGTAGGCCACCGTGTTGCGAGGAGACTGGTGTGAAGAAAGGGCCTTGGATGCCCGAAGAAGATGAGAAGCTTTTCAATTGTATCAGCAAACATGGCAGCGGAAATTGGAAAACAGTTCCAAAGCAAGCGGGCCTTAATAGATGCGGCAAAAGCTGCAGGCTAAGATGGACCAATTATCTCAGGCCTGATATCAAGAGAGGCAAATTCACTGAAGAAGAGGAGAAATTGATCATCAAACTTCACTCTGTTCTTGGAAACAAGTGGTCGAAGATTGCAACGCATCTTCCAGGGAGGACTGACAACGAGATTAAGAATCTCTGGAACACCAACTTAAGGAAGAAGCTTCTCCAGATGGGTATTGATCCAGAAACTCACAAGCCAAGAACTGACTTGAAGCATCTCTTGAACCTCTCGCAATTTCTTGGCGTGGCTAATAATAACTTGACGAGCCATTGGGGCCATGCGGGTCTGGGTTTACAGCAACCAGATGTGACTCATCAGTTGGTCCAAATCCAACTTCTGCAGAATCTGTTGCAGCTTATGAATGGCAGTTCATCGTTGCTCAGTAACATGCAGAGTAGTCTCGCACTCTTGGGCAATCACAGTTTGATCAGTAACCCAGTGGAAGCAGATACAAATGGTCCAAACAGTACTCTCCCCAACAACTTGAGAGAT 678 0.4602 MGRPPCCEETGVKKGPWMPEEDEKLFNCISKHGSGNWKTVPKQAGLNRCGKSCRLRWTNYLRPDIKRGKFTEEEEKLIIKLHSVLGNKWSKIATHLPGRTDNEIKNLWNTNLRKKLLQMGIDPETHKPRTDLKHLLNLSQFLGVANNNLTSHWGHAGLGLQQPDVTHQLVQIQLLQNLLQLMNGSSSLLSNMQSSLALLGNHSLISNPVEADTNGPNSTLPNNLRD 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4260g00069 226 FunFam MYB-related transcription factor 13 66 - -
Pral4260g00069 226 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral4260g00069 226 CDD SANT 69 112 IPR001005 -
Pral4260g00069 226 SMART sant 13 63 IPR001005 -
Pral4260g00069 226 SMART sant 66 114 IPR001005 -
Pral4260g00069 226 Gene3D - 13 66 - -
Pral4260g00069 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pral4260g00069 226 CDD SANT 16 61 IPR001005 -
Pral4260g00069 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 61 IPR017930 -
Pral4260g00069 226 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pral4260g00069 226 FunFam Transcription factor MYB39 69 130 - -
Pral4260g00069 226 Gene3D - 68 135 - -
Pral4260g00069 226 PANTHER F14D16.11-RELATED 1 148 - -
Pral4260g00069 226 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral4260g00069 226 MobiDBLite consensus disorder prediction 207 226 - -
Pral4260g00069 226 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral4260g00069 226 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4260g00069 Pral-Chr4260 484271 485046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4260g00069 1 207 MYB Transcription Factor Family AT5G16770 58.491 8.87e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4260g00069 Myb_DNA-binding 6.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4260g00069 K09422 - gmx:100803906 282.722