Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4260g00035 ATGGATTCAAGCTTGAACATAGGGGGATTACGCTTCTTTCAGACCATAACGATGGAGAAATTGGACATTTGGATATTCAGACTTGTTCTGGTATATTCCCTCTGCATTTTCGTATTCGTCAGATCATCTTCTGCAAATGAAGGATTTGTAAGCATAGCTTGTTGTGCTGATTCAAGATACACAGACCCAGAGACCAACTTGAGTTACAAATCAGATTACACTTGGTTTCCAGATAAAACTAGCTGCATAAGCTTGACCAATCATAACGCAAACCAAACAGGCAACCAAAGAGCAAGAGTGTTTGATATTACAGATAAGGGAAAGAGATGTTACAGCTTGCCAACAATTCAGAACAAAGTCTATATGTTAAGGGGCTCATTTCCATCTGACAATTCACTTGAGGATTTTTCCTTTAATGTGTCAATTGCAGTAACATCATTAGGTTCAGTAAGACCATCCCAGGACTTGGAATTAGTTGAGGGAATTTTCAGAGCATCTAAGAGCTCCATAGACTTTTGCTTAGTGAAGGAGGAGCAGGAAGATGGGAATCCTTATATTTCTCAGATCGATTTAAGGCCTATACATGAAGAGTATCTGCAGGATTTACATTCTAGCGTTGTAAAACTGGTCAGTAGAAATAATCCAGGGGGCACTGTAAGTGACATCAGGTACCCAACAGACCCAAATGACCGAATCTGGAAAGGAACTTCAAGCTCATCGGCATCTCCCATATCATCATTCAATGTCAGCATCTCTGGCCAAGTTGCCAATGTGACTCCTCCTCTTCAAGTTTTACGAACTGCTCTTACCCATTTTGAGAGATTGGAGTTCATTCACAATGTCTCAGAGACATGGAACCATGACTACCGCGTGTTCATCTACTTCCTTGAATTAAACAATACTGTTAGGTCAGGCCAAAGAGTGTTTGACATCTATCTCAATGGTGACATTAAAGAGAAGAATTTTGATATATTGGCTGGAGGCTCCAACTATAGAGACACAGTGCTGAATGTTTCATCAACTGGTGCGATCAATTTAACCTTGGCCAGAGAATCGAGTTCTGAATACGGACCACTTTGTAATGCATATGAAATTCTGGAAGTTCTTCCATGGATGAAAGAGACCAATCATAATAACTTGAAAGAAATGCTGAAGGTGGCAGAAGAATTGCAGACGCAAAACCAAGGCAATAAAGTGCTAGAGAGTTGGAGTGGAGACCCATGCATGCCTTTTCCTTGGAATGGAGTAGAATGCGATCTTTTGAATGATTCAACTGTTATCAATAAGCTGGATCTTTCTTCAAGTAATCTCAGAGGACCAATTCCTTCAGGTGTCACTGCGTTGAACAACTTAGAAACACTGAACCTGAGTCATAATAACTTCAATGGCAGTGTACCCCCATTTCCTCCTTCCTCTTCGCTGATATCACTAGATCTAAGCTACAATGATCTCACGGGATCGCTTCAGGGATCAATTGCCTCATTATCACATCTAAAATCCTTATATTTCGGCTGCAATCCTCACATGAGCAAGGAGGTCCCATCAAACTTCAACAGTTCACTCAATTCAGATTATGGAAGATGCAATCATAAAAGATCAAGGGCACCACTCATCATTGGAACTGTCACATGTGGGGCGGTCTTGGTTACTTTTGCTCTCGGATTTCTTTTTCTTTGCCGTTGTAAGAAAATATCAATTCCCTGGGGAGGATTTGATGAAAAGAAATACCCTAACCCAATGGCAACAAATATAATCTTCTCTTTGCCCAGTAAAGACGATTTCTTCATGAAGTCAGCATGTATTCAAAAGTTTACCCTGGATTATATAGAGGCAGCCACCGAGAAGTACAAAACATTAATAGGTGAAGGAGGGTTTGGCTGTGTTTACAGGGGCATTCTAGATGATGGTCAAGAAGTGGCAATGAAAGTCCGGTCCGCCACATCAACTCAGGGAACTAAGGAATTTGACAATGAGCTAAATCTGCTTTCTGAGATACAACATGAAAACTTGGTGCCTCTTCTTGGTTACTGTAGTGAAAAGGATCAACAAATTCTGGTGTACCCTTTTATGTCCAATGGCTCTTTACAGGATAGACTTTATGGAGAACCAGCAAAGAGAAAAGTATTAGACTGGCCAACCAGACTTTCAATTGCTCTGGGTGCAGCTCGAGGTTTGGCATATCTTCATACATTTCCGGGGCGTCCCATTATACATAGGGATGTAAAATCGAGCAATATACTTCTGGATCATAGCATGACAGCTAAAGTAGCAGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACATTGGTGCTTCTCTTGAACTAAGAGGAACAGCAGGATATCTGGATCCCGAATACTACACTACCCAGCAGTTATCTGCCAAAAGTGATGTCTTCAGCTTTGGTGTGGTTCTGCTTGAAATTGTGAGTGGTCGGGAACCTCTCAACATCCACAGGCCACGCAATGAGTGGAGCCTAGTAGAATGGACTAAACCATATATAAGAGCAGCAAAAATTGATGAAATTGTGGATCCTGGCATAAAAGGAGGATATCATGCAGAGGCACTGTGGAGAGTGGTGGAAGTAGCACACTCATGTGTTGAAACCTTGTCAAGATTCAGACCTGAGATGGATGATGTTGTGAGAGAGTTGGAGGATGCTCTAATTATAGAGAACAATGCATCAGAATACATGAGGTCTATAGAGAGCCTTGGAGGATCCAATCGCTACTCCTTTGTAATAGAGAAAAGGGTGGTTCCACCATCTACAGCAGATCAATCAACCATCGTAAACCAAAACATGTCATTCCCACAGCCCAGATAG 2829 0.415 MDSSLNIGGLRFFQTITMEKLDIWIFRLVLVYSLCIFVFVRSSSANEGFVSIACCADSRYTDPETNLSYKSDYTWFPDKTSCISLTNHNANQTGNQRARVFDITDKGKRCYSLPTIQNKVYMLRGSFPSDNSLEDFSFNVSIAVTSLGSVRPSQDLELVEGIFRASKSSIDFCLVKEEQEDGNPYISQIDLRPIHEEYLQDLHSSVVKLVSRNNPGGTVSDIRYPTDPNDRIWKGTSSSSASPISSFNVSISGQVANVTPPLQVLRTALTHFERLEFIHNVSETWNHDYRVFIYFLELNNTVRSGQRVFDIYLNGDIKEKNFDILAGGSNYRDTVLNVSSTGAINLTLARESSSEYGPLCNAYEILEVLPWMKETNHNNLKEMLKVAEELQTQNQGNKVLESWSGDPCMPFPWNGVECDLLNDSTVINKLDLSSSNLRGPIPSGVTALNNLETLNLSHNNFNGSVPPFPPSSSLISLDLSYNDLTGSLQGSIASLSHLKSLYFGCNPHMSKEVPSNFNSSLNSDYGRCNHKRSRAPLIIGTVTCGAVLVTFALGFLFLCRCKKISIPWGGFDEKKYPNPMATNIIFSLPSKDDFFMKSACIQKFTLDYIEAATEKYKTLIGEGGFGCVYRGILDDGQEVAMKVRSATSTQGTKEFDNELNLLSEIQHENLVPLLGYCSEKDQQILVYPFMSNGSLQDRLYGEPAKRKVLDWPTRLSIALGAARGLAYLHTFPGRPIIHRDVKSSNILLDHSMTAKVADFGFSKYAPQEGDIGASLELRGTAGYLDPEYYTTQQLSAKSDVFSFGVVLLEIVSGREPLNIHRPRNEWSLVEWTKPYIRAAKIDEIVDPGIKGGYHAEALWRVVEVAHSCVETLSRFRPEMDDVVRELEDALIIENNASEYMRSIESLGGSNRYSFVIEKRVVPPSTADQSTIVNQNMSFPQPR 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4260g00035 942 SUPERFAMILY Protein kinase-like (PK-like) 595 886 IPR011009 -
Pral4260g00035 942 Gene3D Transferase(Phosphotransferase) domain 1 690 902 - -
Pral4260g00035 942 ProSiteProfiles Leucine-rich repeat profile. 450 472 IPR001611 GO:0005515
Pral4260g00035 942 ProSiteProfiles Protein kinase domain profile. 614 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4260g00035 942 Pfam Protein tyrosine and serine/threonine kinase 617 886 IPR001245 GO:0004672|GO:0006468
Pral4260g00035 942 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 690 899 - -
Pral4260g00035 942 Gene3D Ribonuclease Inhibitor 380 532 IPR032675 -
Pral4260g00035 942 SMART serkin_6 614 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4260g00035 942 CDD STKc_IRAK 620 887 - -
Pral4260g00035 942 SUPERFAMILY L domain-like 398 518 - -
Pral4260g00035 942 Gene3D - 208 368 - -
Pral4260g00035 942 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Pral4260g00035 942 PANTHER OS07G0107800 PROTEIN-RELATED 50 890 - -
Pral4260g00035 942 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Pral4260g00035 942 FunFam receptor-like protein kinase FERONIA 587 689 - -
Pral4260g00035 942 Pfam Malectin-like domain 57 367 IPR024788 -
Pral4260g00035 942 Gene3D Phosphorylase Kinase; domain 1 587 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4260g00035 Pral-Chr4260 234072 240146 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4260g00035 35 893 Receptor kinase-like Gene Family AT1G67720 33.073 6.46e-129 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral4260g00035 Malectin_like 7e-47 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4260g00035 - - pcin:129311567 1657.88