Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4260g00034 ATGGAGAAATTGGACATTTGGATATTCAGACTTGTTCTGGTATATTCCCTCTGCATTTTCGTATTCGTCAGATCATCTTCTGCAAATGAAGGATTTGTAAGCATAGCTTGTTGTGCTGATTCAAGATACACAGACCCAGAGACCAACTTGAGTTACAAATCAGATTACACTTGGTTTCCAGATAAAACTAGCTGCATAAGCTTGACCAATCATAACGCAAACCAAACAGGCAACCAAAGAGCAAGAGTGTTTGATATTACAGATAAGGGAAAGAGATGTTACAGCTTGCCAACAATTCAGAACAAAGTCTATATGTTAAGGGGCTCATTTCCATCTGACAATTCACTTGAGGATTTTTCCTTTAATGTGTCAATTGCAGTAACATCATTAGGTTCAGTAAGACCATCCCAGGACTTGGAATTAGTTGAGGGAATTTTCAGAGCATCTAAGAGCTCCATAGACTTTTGCTTAGTGAAGGAGGAGCAGGAAGATGGGAATCCTTATATTTCTCAGATCGATTTAAGGCCTATACATGAAGAGTATCTGCAGGATTTACATTCTAGCGTTGTAAAACTGGTCAGTAGAAATAATCCAGGGGGCACTGTAAGTGACATCAGGTACCCAACAGACCCAAATGACCGAATCTGGAAAGGAACTTCAAGCTCATCGGCATCTCCCATATCATCATTCAATGTCAGCATCTCTGGCCAAGTTGCCAATGTGACTCCTCCTCTTCAAGTTTTACGAACTGCTCTTACCCATTTTGAGAGATTGGAGTTCATTCACAATGTCTCAGAGACATGGAACCATGACTACCGCGTGTTCATCTACTTCCTTGAATTAAACAATACTGTTAGGTCAGGCCAAAGAGTGTTTGACATCTATCTCAATGGTGACATTAAAGAGAAGAATTTTGATATATTGGCTGGAGGCTCCAACTATAGAGACACAGTGCTGAATGTTTCATCAACTGGTGCGATCAATTTAACCTTGGCCAGAGAATCGAGTTCTGAATACGGACCACTTTGTAATGCATATGAAATTCTGGAAGTTCTTCCATGGATGAAAGAGACCAATCATAATAACTTGAAAGAAATGCTGAAGGTGGCAGAAGAATTGCAGACGCAAAACCAAGGCAATAAAGTGCTAGAGAGTTGGAGTGGAGACCCATGCATGCCTTTTCCTTGGAATGGAGTAGAATGCGATCTTTTGAATGATTCAACTGTTATCAATAAGCTGGATCTTTCTTCAAGTAATCTCAGAGGACCAATTCCTTCAGGTGTCACTGCGTTGAACAACTTAGAAACACTGAACCTGAGTCATAATAACTTCAATGGCAGTGTACCCCCATTTCCTCCTTCCTCTTCGCTGATATCACTAGATCTAAGCTACAATGATCTCACGGGATCGCTTCAGGGATCAATTGCCTCATTATCACATCTAAAATCCTTATATTTCGGCTGCAATCCTCACATGAGCAAGGAGGTCCCATCAAACTTCAACAGTTCACTCAATTCAGATTATGGAAGATGCAATCATAAAAGATCAAGGGCACCACTCATCATTGGAACTGTCACATGTGGGGCGGTCTTGGTTACTTTTGCTCTCGGATTTCTTTTTCTTTGCCGTTGTAAGAAAATATCAATTCCCTGGGGAGGATTTGATGAAAAGAAATACCCTAACCCAATGGCAACAAATATAATCTTCTCTTTGCCCAGTAAAGACGATTTCTTCATGAAGTCAGCATGTATTCAAAAGTTTACCCTGGATTATATAGAGGCAGCCACCGAGAAGTACAAAACATTAATAGGTGAAGGAGGGTTTGGCTGTGTTTACAGGGGCATTCTAGATGATGGTCAAGAAGTGGCAATGAAAGTCCGGTCCGCCACATCAACTCAGGGAACTAAGGAATTTGACAATGAGCTAAATCTGCTTTCTGAGATACAACATGAAAACTTGGTGCCTCTTCTTGGTTACTGTAGTGAAAAGGATCAACAAATTCTGGTGTACCCTTTTATGTCCAATGGCTCTTTACAGGATAGACTTTATGGAGAACCAGCAAAGAGAAAAGTATTAGACTGGCCAACCAGACTTTCAATTGCTCTGGGTGCAGCTCGAGGTTTGGCATATCTTCATACATTTCCGGGGCGTCCCATTATACATAGGGATGTAAAATCGAGCAATATACTTCTGGATCATAGCATGACAGCTAAAGTAGCAGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACATTGGTGCTTCTCTTGAACTAAGAGGAACAGCAGGATATCTGGATCCCGAATACTACACTACCCAGCAGTTATCTGCCAAAAGTGATGTCTTCAGCTTTGGTGTGGTTCTGCTTGAAATTGTGAGTGGTCGGGAACCTCTCAACATCCACAGGCCACGCAATGAGTGGAGCCTAGTAGAATGGACTAAACCATATATAAGAGCAGCAAAAATTGATGAAATTGTGGATCCTGGCATAAAAGGAGGATATCATGCAGAGGCACTGTGGAGAGTGGTGGAAGTAGCACACTCATGTGTTGAAACCTTGTCAAGATTCAGACCTGAGATGGATGATGTTGTGAGAGAGTTGGAGGATGCTCTAATTATAGAGAACAATGCATCAGAATACATGAGGTCTATAGAGAGCCTTGGAGGATCCAATCGCTACTCCTTTGTAATAGAGAAAAGGGTGGTTCCACCATCTACAGCAGATCAATCAACCATCGTAAACCAAAACATGTCATTCCCACAGCCCAGATAG 2778 0.4147 MEKLDIWIFRLVLVYSLCIFVFVRSSSANEGFVSIACCADSRYTDPETNLSYKSDYTWFPDKTSCISLTNHNANQTGNQRARVFDITDKGKRCYSLPTIQNKVYMLRGSFPSDNSLEDFSFNVSIAVTSLGSVRPSQDLELVEGIFRASKSSIDFCLVKEEQEDGNPYISQIDLRPIHEEYLQDLHSSVVKLVSRNNPGGTVSDIRYPTDPNDRIWKGTSSSSASPISSFNVSISGQVANVTPPLQVLRTALTHFERLEFIHNVSETWNHDYRVFIYFLELNNTVRSGQRVFDIYLNGDIKEKNFDILAGGSNYRDTVLNVSSTGAINLTLARESSSEYGPLCNAYEILEVLPWMKETNHNNLKEMLKVAEELQTQNQGNKVLESWSGDPCMPFPWNGVECDLLNDSTVINKLDLSSSNLRGPIPSGVTALNNLETLNLSHNNFNGSVPPFPPSSSLISLDLSYNDLTGSLQGSIASLSHLKSLYFGCNPHMSKEVPSNFNSSLNSDYGRCNHKRSRAPLIIGTVTCGAVLVTFALGFLFLCRCKKISIPWGGFDEKKYPNPMATNIIFSLPSKDDFFMKSACIQKFTLDYIEAATEKYKTLIGEGGFGCVYRGILDDGQEVAMKVRSATSTQGTKEFDNELNLLSEIQHENLVPLLGYCSEKDQQILVYPFMSNGSLQDRLYGEPAKRKVLDWPTRLSIALGAARGLAYLHTFPGRPIIHRDVKSSNILLDHSMTAKVADFGFSKYAPQEGDIGASLELRGTAGYLDPEYYTTQQLSAKSDVFSFGVVLLEIVSGREPLNIHRPRNEWSLVEWTKPYIRAAKIDEIVDPGIKGGYHAEALWRVVEVAHSCVETLSRFRPEMDDVVRELEDALIIENNASEYMRSIESLGGSNRYSFVIEKRVVPPSTADQSTIVNQNMSFPQPR 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4260g00034 925 SUPERFAMILY Protein kinase-like (PK-like) 578 869 IPR011009 -
Pral4260g00034 925 Gene3D Transferase(Phosphotransferase) domain 1 673 885 - -
Pral4260g00034 925 Gene3D Ribonuclease Inhibitor 363 515 IPR032675 -
Pral4260g00034 925 Gene3D Phosphorylase Kinase; domain 1 570 672 - -
Pral4260g00034 925 PANTHER OS07G0107800 PROTEIN-RELATED 33 873 - -
Pral4260g00034 925 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 673 882 - -
Pral4260g00034 925 SUPERFAMILY L domain-like 381 501 - -
Pral4260g00034 925 ProSitePatterns Protein kinases ATP-binding region signature. 603 625 IPR017441 GO:0005524
Pral4260g00034 925 Gene3D - 191 351 - -
Pral4260g00034 925 Pfam Malectin-like domain 40 350 IPR024788 -
Pral4260g00034 925 Pfam Protein tyrosine and serine/threonine kinase 600 869 IPR001245 GO:0004672|GO:0006468
Pral4260g00034 925 FunFam receptor-like protein kinase FERONIA 570 672 - -
Pral4260g00034 925 CDD STKc_IRAK 603 870 - -
Pral4260g00034 925 ProSiteProfiles Leucine-rich repeat profile. 433 455 IPR001611 GO:0005515
Pral4260g00034 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 719 731 IPR008271 GO:0004672|GO:0006468
Pral4260g00034 925 SMART serkin_6 597 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4260g00034 925 ProSiteProfiles Protein kinase domain profile. 597 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4260g00034 Pral-Chr4260 234072 240146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4260g00034 18 876 Receptor kinase-like Gene Family AT1G67720 33.073 9.93e-129 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral4260g00034 Malectin_like 6.7e-47 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4260g00034 - - pcin:129311567 1657.88