LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4260g00030	ATGGCTAATACGTTCTGCTCTTCCAATCTTCTTGCTCTGTTATTCTCCTTCTTTTTCTTGTCTCTCTTTGTTGATTCACTTTACTTTCAAAAGTCTGGATTTAGTTCTGACGACACCGATATCCTCTACTTGGGATCTGCAGGATCTCAAGTTGGTACTATTATATTCAACATGAATGACAAGTACACTTGTCAAGTAGGATGGGCCATCTATGCTAGAAGGGTGAAACTTTGGGACTCAAGCACTGGACACATCACAGACTTCACCTCTCATCATACTTTTACTATAGACACTGAAGGTAAAACTAGTTATGGCCATGGGCTTTGCTTCTTCCTTGCTCCTTTTGGTTTTGAAATCCCTCCAAATTCTGCTAGTGGCTTTCTAGGCTTATTCAATACCACAACGAGTCTTTCATCCAAAAGCCAAATTGTTCATGTGGAGTTTGACACTTACCCAAATTCTGAATGGGGTGAGACCACACAACATGTGGGAATCAACAATCATTCTATTGTTTCATCATTGTCTACGTTTTGGAATGCTAGCCTACATAGTGGTGATACCGCAGATGTGTGGATTACCTATAACTCTACCTCAAAGAACTTGAGTGTATCATGGAAATACCATAATACACAGAGTTCTCAAGAGAACAATAGTCTTTCTTATCCAATTGATTTATCTAACGCATTGCCTGAATGGGTTACAATTGGATTTTCTGCTGCAACTGGATCGTTTGGAGAACTTCATACCCTTCTCTCTTGGGAGTTCAATTCAACTTTAGACGATACAGAACAGAACAACAAGAAGACAACTCTCACGGTGATTCTGAGCATTGTTTTAGGGATTATTGGTTTGATAGCTGGAGGAGCAATTATAGCATATGCATTATTTCGGAGGAAGAAGAAAATGAGAAGCAAAAAGGAAGAAGCTGTGAACTTAACATCAATGAATGATGATCTTGAAAGAGGGGCAGGACCAAGAAGATTCTCTCATAAAGAGCTTGCGAAAGCTACCAATGATTTCTCTGAGAACAGGAAATTGGGTCAAGGTGGGTTTGGAGCTGTTTATCGTGGTTATTTTCCTGATATAGACTTAACAGTTGCAGTGAAGAAAATATCAAGAGGATCAAGACAAGGAAAAAGAGAGTATGTAACTGAGGTTAAGATTATTAGTCAACTAAGACACAGGAATCTTGTGCAGCTTATCGGTTGGTGTCATGAAAAAGGCGAGTTTCTACTTGTTTATGAGTTCATGCCGAATGGTAGCCTTGATGCTCATTTGTCAGGGAAGAAGCCTCCTCTTCCGTGGAGTGTGAGGCACAAGATAGTTCTAGGGTTGGCCTCAGGAATGTTGTACCTTCATGAAGAATGGGAACAATGCGTGGTTCACAGAGATATCAAGTCAAGCAATATAATGCTAGATTCCAGTTTCAATGTAAAACTTGGAGATTTTGGATTGGCCAAACTCGTGGACCACGATCTAGGACCCCAAACAACCGGATTGGCAGGAACATTAGGATATATGGCTCCAGAATATGTGAGTACAGGTAGGGCCAGTAAGGAATCAGATGTTTATAGTTTTGGAGTAGTTGTTTTGGAAATAGCCACAGGAAGAAAGGCAAATGACGTTATGAAGGATGGAGATGCAGAAGTAGGATTGATTGAGTGGATTTGGGATCATTATGGAAGAGGAGATCTAGCTTTGGCCATGGATGAAAAGTTGACGAAGGACCATGATGAGAGAGAAGTGGAGTGTTTAATGATTGTCGGGTTATGGTGTGCCCACCCAGATAAGAATTTAAGGCCAACTATTAGGCAAGCAATTCAGGTGTTATGCTTTGAGGCTGCCCTGCCAGACCTTCCACTAAAGAAGCCCGTTCCAATGTATCATGTTCCCACACCAAAAGTAGTCTCTGAAGCTGCTTTCTCAAATACAACTCTGCAAAGTGGTCGTTAA	1953	0.4091	MANTFCSSNLLALLFSFFFLSLFVDSLYFQKSGFSSDDTDILYLGSAGSQVGTIIFNMNDKYTCQVGWAIYARRVKLWDSSTGHITDFTSHHTFTIDTEGKTSYGHGLCFFLAPFGFEIPPNSASGFLGLFNTTTSLSSKSQIVHVEFDTYPNSEWGETTQHVGINNHSIVSSLSTFWNASLHSGDTADVWITYNSTSKNLSVSWKYHNTQSSQENNSLSYPIDLSNALPEWVTIGFSAATGSFGELHTLLSWEFNSTLDDTEQNNKKTTLTVILSIVLGIIGLIAGGAIIAYALFRRKKKMRSKKEEAVNLTSMNDDLERGAGPRRFSHKELAKATNDFSENRKLGQGGFGAVYRGYFPDIDLTVAVKKISRGSRQGKREYVTEVKIISQLRHRNLVQLIGWCHEKGEFLLVYEFMPNGSLDAHLSGKKPPLPWSVRHKIVLGLASGMLYLHEEWEQCVVHRDIKSSNIMLDSSFNVKLGDFGLAKLVDHDLGPQTTGLAGTLGYMAPEYVSTGRASKESDVYSFGVVVLEIATGRKANDVMKDGDAEVGLIEWIWDHYGRGDLALAMDEKLTKDHDEREVECLMIVGLWCAHPDKNLRPTIRQAIQVLCFEAALPDLPLKKPVPMYHVPTPKVVSEAAFSNTTLQSGR	650

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4260g00030	650	CDD	lectin_legume_LecRK_Arcelin_ConA	27	259	IPR001220	GO:0030246
	Pral4260g00030	650	PANTHER	-	54	611	-	-
	Pral4260g00030	650	SMART	serkin_6	340	612	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4260g00030	650	CDD	STKc_IRAK	346	611	-	-
	Pral4260g00030	650	Gene3D	Phosphorylase Kinase; domain 1	325	416	-	-
	Pral4260g00030	650	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	460	472	IPR008271	GO:0004672\|GO:0006468
	Pral4260g00030	650	Gene3D	Transferase(Phosphotransferase) domain 1	417	631	-	-
	Pral4260g00030	650	FunFam	L-type lectin-domain containing receptor kinase IX.1	25	268	-	-
	Pral4260g00030	650	Gene3D	-	24	280	-	-
	Pral4260g00030	650	SUPERFAMILY	Protein kinase-like (PK-like)	324	634	IPR011009	-
	Pral4260g00030	650	SUPERFAMILY	Concanavalin A-like lectins/glucanases	25	269	IPR013320	-
	Pral4260g00030	650	FunFam	Lectin-domain containing receptor kinase A4.3	417	630	-	-
	Pral4260g00030	650	Pfam	Legume lectin domain	27	268	IPR001220	GO:0030246
	Pral4260g00030	650	ProSitePatterns	Protein kinases ATP-binding region signature.	346	370	IPR017441	GO:0005524
	Pral4260g00030	650	ProSiteProfiles	Protein kinase domain profile.	340	616	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4260g00030	650	FunFam	L-type lectin-domain containing receptor kinase IX.1	325	416	-	-
	Pral4260g00030	650	Pfam	Protein kinase domain	341	608	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4260g00030	650	ProSitePatterns	Legume lectins alpha-chain signature.	229	238	IPR000985	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4260g00030	Pral-Chr4260	185537	187648	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4260g00030	13	629	Receptor kinase-like Gene Family	AT5G10530	58.360	0.0	727

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Pral4260g00030		Pkinase	1.4e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4260g00030	-		-	qsa:O6P43_033286	863.218