Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4260g00029 ATGGCCCATACTTTCTGCTATTCCCATCTTCTTCCTCTACTATTCTCATTCTTCTCCTTATTTCTCTTTGGTAATTCACTCTACTTTAAAAAAGTTGGATTTGACACTAACGATGCCGACATCCTCTACATGGGATCTGCAGGATCTCGAGTTGGCACTGTTCGATTCAACATCTATGAAAAGTATACTTGTCAAGTTGGATGGGCTATCTATGCTAGAAGGGTCAAGCTTTGGGACTCAAGTACTGGACGCATCGCTGACTTCACCTCTCATTATACTTTCACAATAGATAATGAAGGTAAAACTATTTATGGTCATGGACTTTGCTTCTTCCTTGCTCCTTTTGGTTTTGAAATCCCTCCAAATTCTGCTAGCGGCTTTTTGGGCCTATTCAATATTACAACCGGTGTATCATCACAAAGCCAGATTGTTCATGTGGAGTTTGACTCTTATGCAAATAGTGAATGGGGTGAGATGACGCAACATGTGGGAATCAACAATCACTCTCTTGTCTCATCAGTATCTACATATTGGAATGCTAGTCTACACAGTGATGATGTTGCAGATGTGTGGATTACCTACAACTCTACATTGAAGAACTTGAGTGTATCATGGAAATACCAGAAAACGCACAATCCTCAAGAGAACAATAGTCTTTCTTATATAATTGATTTATCTAAGGCATTGCCTGAATGGATTACAGTTGGATTTTCCACAGCATCGGGGTCATTAGGAGAAATTGATACTCTTCTCTCTTGGGAGTTCAACTCAACTTTGGATGATACAGAACAAAGCAAAAACAAGACAACACTTGCGGTGATTCTGAGCATAGTTTTAGGGGGTATTGCTTTGATAGTTGGAGGAGCAATTGTTGCATATGCGTTACTTTGGAGGAAGAAGAAAACAAGAAGTGCACAAGAAGAAGGTATGAACTTAACAACAATGAATGATGATCTTGAAAGAGGAGCAGGACCAAGAAGATTCTCTCATAAAGAGCTTGCGAAAGCTACCAATAATTTCTCTGAGAACAGAAAATTGGGTCAAGGTGGGTTTGGAGCTGTTTATCGTGGTTATTTTCCTGAAATAGACTTAACAGTTGCGGTGAAGAAAATATCAACAGGATCAAGACAAGGAAAAAGAGAGTATGTAACTGAGGTTAAGATTATTAGTCAACTAAGACATAGGAATCTTGTGCAGCTTATCGGTTGGTGTCACGAAAAAGGCGAGTTTCTACTTGTCTATGAGTTTATGCCAAATGGTAGCCTTGATGCTCATTTGTCAGGAAAGAAACCTCCTCTTCCATGGAGTGTGAGGCACAAGATAGTTCGAGGGTTAGTCTCAGGAGTGCTATACCTTCATGAAGAATGGGAACAATACGTGGTTCACAGAGATATCAAGTCAAGTAATATAATGCTAGATTCTAGTTTCAATGTAAAACTTGGAGATTTTGGGTTGGCCAAACTTGTGGATCATGATTTGGGACCCCAAACAACGGGATTGGCAGGCACAATGGGTTATATGGCTCCCGAATATATGAGTACAGGTAGGGCAAGTAAGGAATCAGATGTTTATAGTTTTGGAGTAGTTGCCTTAGAGATAGCCACAGGAAGGCAAGCAAATGACCTTATGCAGGATAGAGGTGCAGAATTAGGATTGGTCGAGTGGGTTTGGGATCATTATGGAAGAAGAGAGCTAGCTTTGGCAATGGATAAAATTTTGGGAAAAGACTATGATGAGAGAGAAGTAGAGTGTTTGATGATTGTAGGGTTGTGGTGCGCCCACCCAGAAAGGAATTTGAGGCCAACTATTAGGCAAGCAATCCAGGTGTTATGCTTGGAGGCTGCACTGCCAGACCTTCCACCAAAGAAGCCTGTTCCAATATATTATGTTCCCTCAACAAAAGAGATCTCCGAACCTGCTTTCTTGACTACGACCCTGCAAACAGGTCGTTGA 1953 0.4086 MAHTFCYSHLLPLLFSFFSLFLFGNSLYFKKVGFDTNDADILYMGSAGSRVGTVRFNIYEKYTCQVGWAIYARRVKLWDSSTGRIADFTSHYTFTIDNEGKTIYGHGLCFFLAPFGFEIPPNSASGFLGLFNITTGVSSQSQIVHVEFDSYANSEWGEMTQHVGINNHSLVSSVSTYWNASLHSDDVADVWITYNSTLKNLSVSWKYQKTHNPQENNSLSYIIDLSKALPEWITVGFSTASGSLGEIDTLLSWEFNSTLDDTEQSKNKTTLAVILSIVLGGIALIVGGAIVAYALLWRKKKTRSAQEEGMNLTTMNDDLERGAGPRRFSHKELAKATNNFSENRKLGQGGFGAVYRGYFPEIDLTVAVKKISTGSRQGKREYVTEVKIISQLRHRNLVQLIGWCHEKGEFLLVYEFMPNGSLDAHLSGKKPPLPWSVRHKIVRGLVSGVLYLHEEWEQYVVHRDIKSSNIMLDSSFNVKLGDFGLAKLVDHDLGPQTTGLAGTMGYMAPEYMSTGRASKESDVYSFGVVALEIATGRQANDLMQDRGAELGLVEWVWDHYGRRELALAMDKILGKDYDEREVECLMIVGLWCAHPERNLRPTIRQAIQVLCLEAALPDLPPKKPVPIYYVPSTKEISEPAFLTTTLQTGR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4260g00029 650 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 263 IPR013320 -
Pral4260g00029 650 SUPERFAMILY Protein kinase-like (PK-like) 324 633 IPR011009 -
Pral4260g00029 650 Pfam Legume lectin domain 29 268 IPR001220 GO:0030246
Pral4260g00029 650 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Pral4260g00029 650 CDD STKc_IRAK 346 611 - -
Pral4260g00029 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Pral4260g00029 650 Pfam Protein kinase domain 341 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4260g00029 650 Gene3D Transferase(Phosphotransferase) domain 1 417 630 - -
Pral4260g00029 650 SMART serkin_6 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4260g00029 650 CDD lectin_legume_LecRK_Arcelin_ConA 33 259 IPR001220 GO:0030246
Pral4260g00029 650 ProSiteProfiles Protein kinase domain profile. 340 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4260g00029 650 FunFam L-type lectin-domain containing receptor kinase IX.1 325 416 - -
Pral4260g00029 650 ProSitePatterns Protein kinases ATP-binding region signature. 346 370 IPR017441 GO:0005524
Pral4260g00029 650 Gene3D - 25 274 - -
Pral4260g00029 650 FunFam Lectin-domain containing receptor kinase A4.3 417 630 - -
Pral4260g00029 650 PANTHER - 54 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4260g00029 Pral-Chr4260 176392 178537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4260g00029 13 629 Receptor kinase-like Gene Family AT5G10530 57.600 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral4260g00029 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4260g00029 - - qsa:O6P43_033286 840.491