Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4260g00027 ATGAACCTAATACACTTCCAAGGTGATGCCTTCTCGTCGGATGATGCTCTTCAGCTCACAAAGAACCGACTCGATGGCCCCATCACAAGCAGTGTTGGTCGGGCTTCATATGCTGAACCGGTTCGTGTTTGGGATCGAACAACTGGGAAGCTCACAGACTTCACCACCCATTTTACCTTTATCATGAAAGCCGTTGCTCCCACACAATTCGGTGATGGGATATCCTTCTTCCTTTCGCCTTTCCAATCTGAAATCCCACACAATTCAACTGGTGGGTACCTTGGTCTCTTCAGTCCAGAATCTGCATTCGATGATACCAATAATTCCATAGTTGCGGTTGAGTTCGACAGCTTTAACAACACGTGGGATCCAAGCTCGGACCATGTCGGAATCAATGTGAATTCCATTGTATCAGTTGCGAATGTTTCCTGGAGGAGTAGCATGAAGCAGGGGAGAAAAGCTAATGCTTGGATAGAATATAATTCTACCACAAAAAATCTGAGTGTGTTCCTTACTTATGCTGATGATCCAGTTTATATGGGTAATTCTAGCGTTTGGTACATCATTGATTTGAGGGAAGTTTTGCCAGAATGGGTCTGTGTTGGATTTTCTGCTTCTACAGGTTATTGGGTTGAATTACACAAAATCCTGTCTTGGTCATTCAATTCAAGCTTGGAAGGTGATGATAAGGTTGGGAAAAACAACAAGGTTGTTTTGGGGGCTAGTTTAGGTGTCGGTCTTGGTTCTCTTATTTGTGCTGCTGGATTGTTATGGTTCGCCATTTGGAGAAAGAAACATTACAGGAAGAAGGAAGTAGAAGGTAAAGGCTTGGAAGCTTCCATTGATGATGAATTTGAGAAAGGAACAGGACCGAAGAGATTCACCTACCAGCAACTGAGTCAAGCAACAAATGATTTTTCTGAAGCAGGAAAGCTAGGAGAAGGAGGATTTGGAGGTGTTTACAAAGGTCTTCTCACAAACGAAAACCTACAAGTGGCTGTGAAGAGAGTTTCAAAAGGATCAAAACAGGGGAAAAAAGAATACGTATCAGAAGTGAGAATCATCAGCAGGTTGAGACACAGAAACTTAGTCCAACTCTTTGGGTGGTGCCATGAACAAGGTGAGTTCCTTCTTGTTTATGAATTCATGCCTAATGGAAGTCTGGATTCCCACCTGTTTGGAAACAAAACCCCGCTTACTTGGACAGTAAGGTACAAGATAGCCTTGGGTCTGGCTTCTTCTCTCCTGTATCTTCATGAAGAATGGGAACAATGTGTAGTCCACAGAGATATTAAGTCAAGTAATGTCATGTTAGACGCAAATTTCAATGCAAAACTAGGTGATTTTGGTCTTGCAAGGCTAGTTGACCATGAACTTGGGTCTCAAACTACAGTTCTAGCAGGCACAATGGGGTACCTAGCCCCAGAATGTGTAACCACAGGAAAAGCAAGTAAGGAATCTGATCTTTATAGCTTTGGGGTAGTGGCCCTAGAGATCGCATGTGGAAGAAGACCCATTGAAATAAGAGCTGAAGAACCAGGCAAGGTAAGAATGGTGGAGTGGGTGTGGGACCTATACGGAAAAGGGACGCTTCTAGAAGCTGCTGATAAGAATCTAAACATGGAATATGATGAGAGACAAATGGAGTGCTTGATGATTGTAGGGTTATGGTGTTGCCATCCTGATCAAAGGATGAGACCTTCCATAAGACAAGTCATAAATGTGCTCAATTTTGAAGGTGCTTTTCCAAGTCTTCCTCCCAAGCTTCCAGTTGCTATGTATTATGCTCCTCCCATGGAAATGTGCAGATTCTCATACACATCGTCTGGGCCCACTGCATCAACCAAAGGATCATCCTCGTACTCAACAGTATCAGGAGGATCCAGAAAGTCCCTCTTGCTAGCACAATGA 1911 0.4343 MNLIHFQGDAFSSDDALQLTKNRLDGPITSSVGRASYAEPVRVWDRTTGKLTDFTTHFTFIMKAVAPTQFGDGISFFLSPFQSEIPHNSTGGYLGLFSPESAFDDTNNSIVAVEFDSFNNTWDPSSDHVGINVNSIVSVANVSWRSSMKQGRKANAWIEYNSTTKNLSVFLTYADDPVYMGNSSVWYIIDLREVLPEWVCVGFSASTGYWVELHKILSWSFNSSLEGDDKVGKNNKVVLGASLGVGLGSLICAAGLLWFAIWRKKHYRKKEVEGKGLEASIDDEFEKGTGPKRFTYQQLSQATNDFSEAGKLGEGGFGGVYKGLLTNENLQVAVKRVSKGSKQGKKEYVSEVRIISRLRHRNLVQLFGWCHEQGEFLLVYEFMPNGSLDSHLFGNKTPLTWTVRYKIALGLASSLLYLHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKASKESDLYSFGVVALEIACGRRPIEIRAEEPGKVRMVEWVWDLYGKGTLLEAADKNLNMEYDERQMECLMIVGLWCCHPDQRMRPSIRQVINVLNFEGAFPSLPPKLPVAMYYAPPMEMCRFSYTSSGPTASTKGSSSYSTVSGGSRKSLLLAQ 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4260g00027 636 FunFam Lectin-domain containing receptor kinase A4.3 383 596 - -
Pral4260g00027 636 SUPERFAMILY Concanavalin A-like lectins/glucanases 4 226 IPR013320 -
Pral4260g00027 636 ProSitePatterns Legume lectins beta-chain signature. 111 117 IPR019825 -
Pral4260g00027 636 ProSitePatterns Legume lectins alpha-chain signature. 195 204 IPR000985 -
Pral4260g00027 636 Gene3D Transferase(Phosphotransferase) domain 1 383 596 - -
Pral4260g00027 636 CDD lectin_legume_LecRK_Arcelin_ConA 2 225 IPR001220 GO:0030246
Pral4260g00027 636 SUPERFAMILY Protein kinase-like (PK-like) 290 603 IPR011009 -
Pral4260g00027 636 FunFam L-type lectin-domain containing receptor kinase IX.1 291 382 - -
Pral4260g00027 636 CDD STKc_IRAK 320 577 - -
Pral4260g00027 636 FunFam L-type lectin-domain containing receptor kinase IX.1 1 234 - -
Pral4260g00027 636 Gene3D - 1 239 - -
Pral4260g00027 636 PANTHER - 19 578 - -
Pral4260g00027 636 MobiDBLite consensus disorder prediction 612 630 - -
Pral4260g00027 636 ProSiteProfiles Protein kinase domain profile. 306 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4260g00027 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Pral4260g00027 636 ProSitePatterns Protein kinases ATP-binding region signature. 312 335 IPR017441 GO:0005524
Pral4260g00027 636 Pfam Protein kinase domain 307 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4260g00027 636 MobiDBLite consensus disorder prediction 612 636 - -
Pral4260g00027 636 Pfam Legume lectin domain 4 230 IPR001220 GO:0030246
Pral4260g00027 636 Gene3D Phosphorylase Kinase; domain 1 291 382 - -
Pral4260g00027 636 SMART serkin_6 306 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4260g00027 Pral-Chr4260 146589 148532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4260g00027 4 595 Receptor kinase-like Gene Family AT5G10530 51.888 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral4260g00027 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4260g00027 - - gmx:100777201 954.896